Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4630 |
Symbol | |
ID | 6127450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 1624257 |
End bp | 1626293 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641651725 |
Product | hypothetical protein |
Protein accession | YP_001778258 |
Protein GI | 170736998 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000169623 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAGATG AGGAATCAGC TGAGCACCCG CTGTTTTCAG AGCGCATCGT GCGAGGACGG TCGATTGATG TGTCTCAATG GGCAACGCCT GATGTCGGTG CGATGACGGA CTCGCGTCGA GCACTCTACT TCGCAAGACA GCGAGCAGTA GAGATGTATC TGTCCAACGC TTCGTCAGAG TCGATCAAGC AAGCGACAGC GCTGAGCGCC AAGCAAGCGT ATCGCCTGAT CAGCGAGCGT TGCCTGGAGA CACATGAGGA TGGGCGCGAG TTCGGTTGGC GAGGTTTGAT TCCCTACGAG CGAATGAAAC CGTACCGCCG GATCCATCGG ATTCGGGTAG ACAATTATGG TGGGGGCGCA GTTGGGGCGA TGCAGACTCT TCTCGATGCG CATCCAGAGC TCAGGGCGGC GTTCGATGCC CGAATTCTGA CGATTCCGCG CGCCGGCCAG CTCACCGAAA TCAAGCGTGC GAGAACACGC CATCAAAGCT GGTTTCTCGA CCAGCTTCGC GTTCTCGGCT ATGAAGTGCG AGAGGAATGG CCTTTCAATA CAGTTAGCCG CGGGTATTTC TCGATCAGAC GGTACGTCGA GAAGGTATTG TTGGCGAATC CCAAGGTCAT GGCGCACGAA GCCGGCGGTC CGGACCTGGT CAAGAAACTG GCGACCGGTG ATGGGACCAA CCGTCCGGTT TCACGGTTTA TGCAGCGTGT GGAGATGGAC GCACACAAGA CCGATGGCCG GTTTTGTGTA TTGCTTCCGC AGATTGGCGG TGGCTTTCTG GAGAAGATCG TTCACCGGCT CTGGGTCGTC GTGTTGCTGG AGGTGGTTTC TCGAGCAGTG ATCGGCTACT ACGTGAGTCT TGCACGAGAA GTATCCAAGG AAGACGTATT GCGGGCAATT AAGTGCGCGC TGACTCCCTG GGAGCCGAAG CCGGTGACGT TTTGCGACGA AGCGTACCTG CCTGGTGCCG GGCTTTTGTC ATCATTGGGC CCTGAATATA TCGGTCTGTG CTGGGATGAA ACCAGTGTGG ATGGCGCACT TGCCGGGACA TGCCTCCAGG TTCGAGGTGC GCTCCAAGAT GTCGTGGGTG CGAAGCTTCT TGAGCCGACG AACTCATTCT CGAAGCGGCG CAGCAAGGAC GACAGGCCCT TTATTGAGAC CTTCTTTCGG AATTTGGGCG GAAAGGGTTT CCAGCGGCTA TCCAACACGA CTGGCTCGAA GCCCGAGGGG CGCAAGGGCA GGGATCCCGA GGCCGTAGCG TTGACGAGTC GCTTTCAGTA CGAATATGCG GAAGAACTGC TCGATGCTCT GATCGCAAAC TACAACGTTC AGCCCCACAG CGGCATCGGC AACCGCACGC CGCTCGAGTA TGCGAAATTC CTGTATCGCC ATACGGCGTC GGCACTTCGG CATGTCGACT CCACGATGGT CGATTCCATG TTCAGTGTCC GGAAACTATG TACCGTCAGA GGCGGCGCCA GTTCCGGGCG CCGACCTTAT GTCGCATTTT TCAACGCGAC CTATTCAAAC GAAACGCTCG GCGTACGGCA CGACCTCGTC GGATCGAAAA TTTGGGTCAT CGCCCACCAT GAAGATGATG CCAGGACTGC AATGGGCGTC ACGATGGGCG GTGCGCCATT GGGCGTCCTG AGGGCGGCTC CGCCGTGGAA TGGATTGCCG CATAGCGTGG CCGTTCGCAC GGCCATTTGT CAGGCCAACA GGATTGGAAA ATTCCAGATT CCTCCGGGGG CGGATCCGGT CGAAGCGCCG GTGCACTATT CCGAATCGCA AGCGGATAAA AAGCTCCCTG TTCATCCCGC CTATCTGGCC GCTCGCCGAA TCCTGACAGC GGCCGCGGCG CAATCAGTCG GTGACGCGAT GCTGGAAACG GCCCTTGTCC ATGCAAGCGA AGTTGTCGAT CCGCCAGGTG ATTCGCATCA ATATAAAGGT CGAGCCGCCG CCAAACCGAA CGACACGAAG CCACCCCGCT CCTCCATGCC GCTCCCACCA CGCAGAATTG CCTCCACGAG GTCGTGA
|
Protein sequence | MADEESAEHP LFSERIVRGR SIDVSQWATP DVGAMTDSRR ALYFARQRAV EMYLSNASSE SIKQATALSA KQAYRLISER CLETHEDGRE FGWRGLIPYE RMKPYRRIHR IRVDNYGGGA VGAMQTLLDA HPELRAAFDA RILTIPRAGQ LTEIKRARTR HQSWFLDQLR VLGYEVREEW PFNTVSRGYF SIRRYVEKVL LANPKVMAHE AGGPDLVKKL ATGDGTNRPV SRFMQRVEMD AHKTDGRFCV LLPQIGGGFL EKIVHRLWVV VLLEVVSRAV IGYYVSLARE VSKEDVLRAI KCALTPWEPK PVTFCDEAYL PGAGLLSSLG PEYIGLCWDE TSVDGALAGT CLQVRGALQD VVGAKLLEPT NSFSKRRSKD DRPFIETFFR NLGGKGFQRL SNTTGSKPEG RKGRDPEAVA LTSRFQYEYA EELLDALIAN YNVQPHSGIG NRTPLEYAKF LYRHTASALR HVDSTMVDSM FSVRKLCTVR GGASSGRRPY VAFFNATYSN ETLGVRHDLV GSKIWVIAHH EDDARTAMGV TMGGAPLGVL RAAPPWNGLP HSVAVRTAIC QANRIGKFQI PPGADPVEAP VHYSESQADK KLPVHPAYLA ARRILTAAAA QSVGDAMLET ALVHASEVVD PPGDSHQYKG RAAAKPNDTK PPRSSMPLPP RRIASTRS
|
| |