| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4456 |
|---|
| Symbol | |
|---|
| ID | 6127281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1430463 |
|---|
| End bp | 1431224 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641651556 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_001778089 |
|---|
| Protein GI | 170736829 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATA TCCCGATGCA AAGGCCGGCG GCATCGAACG GGCACGCGTC GACCGCACGT
GCCGCGTGCT GCCCGATCCT GATGTATCAC CAGATCCGCC CGCTGCCGCC ACGTTCGGAC
GTATTGCGCG GGCTGAGCGT CGATCCGCGC GCGTTTCGAT GCCAGATGCG CACGCTGAAG
GCGCTCGGCT ATTGCGGTGT GTCGGTCGCG GAACTGCAAG GGCGCCTGGC ACAGACGCGT
AGCGCAAAGC TGTTCGCGAT CACGTTCGAC GACGGCTTTC GCAACGTGTT CGAGCATGCG
TTGCCCGTGC TCGACGAACT CGGATTCACT GCGACCTGCT ACTTCGTATC CGGCAAGCTG
GGCGGCAGCA ACGACTGGGA TCGCGGGATC GCGACCGCCG AGGCCGAGCT GATGGATCGC
GGCGCGATGC TCGAATGGCT GGGGCACGGA CATGAGGTCG GCGCGCACAC CGTCGATCAC
GTTGCACTGT CCGACGTGCC CGCGCCGACG GCGTGGCGGC AGATTACGCA CTCGAAGGCG
CAGCTCGAGG ATGCGACCGG ATGCCCGGTC GTATCGTTTT GCTATCCCTA TGGCGCATTC
GATGCGAACG CGAGGCGGCT GGTCGCTGAA GCGGGCTTCC GTAGCGCGAC GACGACCGCG
CGCGGGCGGG TCAAGGCGTG CACCGACCCG TTTCTGCTGC CGCGCATCGC GGTGCCGGGC
GGGCGAGGTG TCGTCCGCTT CCTCGGGAGG TTCTTCCGGT GA
|
|---|
| Protein sequence | MTDIPMQRPA ASNGHASTAR AACCPILMYH QIRPLPPRSD VLRGLSVDPR AFRCQMRTLK
ALGYCGVSVA ELQGRLAQTR SAKLFAITFD DGFRNVFEHA LPVLDELGFT ATCYFVSGKL
GGSNDWDRGI ATAEAELMDR GAMLEWLGHG HEVGAHTVDH VALSDVPAPT AWRQITHSKA
QLEDATGCPV VSFCYPYGAF DANARRLVAE AGFRSATTTA RGRVKACTDP FLLPRIAVPG
GRGVVRFLGR FFR
|
|---|
| |