Gene Bcen_4961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4961 
Symbol 
ID4094020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp2228499 
End bp2229143 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content71% 
IMG OID638018243 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_624809 
Protein GI107027298 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.373586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGC ATGAAGCCAT GCATCCGCCG GAGGCCGGGT CCGTCGTCGC GATCGTCGAC 
GACGACGAAG CCGTGCGCGA CGGCCTCGCG CTGCTGCTGT GGACCGTCGG CTTGCGCACC 
CGCCGTTTCG CCGATGCGCA CGCGTTTCTC GCGGAAGCCG ACGACAGCAC GCTCGGCTGC 
GTGCTGCTCG ACCTGCGGAT GCCGGGGATG AGCGGGCTCG ACGCGCTCGA TTGTCTCGCC 
GGCCGGCGTA GCCTGCCGGT GATCGTGCTG ACCGGCCATG GCAACGTCGA TGCGTGCCGG 
CGTGCGTTCA AGCGCGGCGC GTGCGATTTC CTGCGCAAGC CGGTCGACGA CGACGAACTG 
ATCGACGTGG TCCAGCAGGC GCTGCGCGGG CACGCGGACC GGCGCGACGG CGACGCGGCG 
GAACAGGCCC GCGCGAGCCG GATGGCGACG CTGAGCGCGC GCGAGCGCGA CGTGCTCGAC 
GGCATCGTGC GCGGCGGCAG CAACAAGGCA ATCGCGCGCG ATCTCGGGCT GTCGCCGCGC 
ACGGTCGAGA CGTATCGCGC GAACCTGTTC GACAAATTGC AGGTCGCGTC GCTCGTCGAG 
CTGGTGCGCG ACTACGCGGC GCTCGCGGGC GTATCGGCGA CGTAG
 
Protein sequence
MSTHEAMHPP EAGSVVAIVD DDEAVRDGLA LLLWTVGLRT RRFADAHAFL AEADDSTLGC 
VLLDLRMPGM SGLDALDCLA GRRSLPVIVL TGHGNVDACR RAFKRGACDF LRKPVDDDEL 
IDVVQQALRG HADRRDGDAA EQARASRMAT LSARERDVLD GIVRGGSNKA IARDLGLSPR 
TVETYRANLF DKLQVASLVE LVRDYAALAG VSAT