Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4048 |
Symbol | |
ID | 4096154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 1218509 |
End bp | 1219465 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638017342 |
Product | LysR family transcriptional regulator |
Protein accession | YP_623910 |
Protein GI | 107026399 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCCAC TGCGCCGCCG GCATCGTCGA GCAATCCGCG TGCCGGCCCC GTTCGCCCAT CTCACCGAGC CCATGTCACT CCGCGCCTTC AGAACGCTCG TCGCCATCGC CCGCTACCGG ACCTTCGCGC GCGCCGGCGA AGCCATCGGC CTCACCCAAT CGGCGGTGAG CCTGCAGATC AAGACGCTCG AAAGCGAATA CAACGTGCAG TTGTTCGACC GTTCGCGCCG GCAGCCGGTG CTCACCGAAG CCGGCAACAT CCTGCTCGCG CAGGCCAAGC AGGTGCTCGC GATGGTCGAC CAGATTCCCG ATGCGCTCAG CGACGAGAAG AAGCTGGTCG GCCGGCTGCG GATCGGCGCG ATCCAGACCG CGTTGTCCGG CCCGCTGCCC GACGCGCTGC TCGCGCTGCG TGCCGCGCAT CCGTCGTTGC GCGTGCACGT GTCGGCCGGC ATGTCGGTGG AACTCGCGAA CCGCGTTGCG GCCGGCGAGC TCGACGCGGC GATCACGACG CGCCCGGTGC GCCCGCATCC GGCGGAACTG ACGTGGACCA CGCTGTACGA GGATCGCTTC TGGCTGCTCG CGCCGCCCGG TCATGCGGAA CGCGACGCGG GCGCGCTGCT CGATGCGCTG CCGTTCATCC GCTTCGACGC GCAGGCGTGG GCCGGCCGGA TGATCGCCGC CGAGCTGCGC CGCATCGGCG TGCGGGTGCG CGAGGAGATG GTGCTGGACA GCGCGGAAAC GATCGCGCGC ATGGTGGCGC GCGGGCTCGG TGCGGCGATC GTCGCGCTCC CCGACGCGAC GCTCGCGCGC CTGCCGCCGG TCACGCGCTT GCCGTTCGGC CAGCCGCAGA TGGGCCGCGC GGTCGTGCTG CTCGAACACC AGTCGCGTCC GGCCGAACGT TTCGCCCGCG CGCTGGCCGC CGAAGTGACC GCGTCATCGA TGAGAATTTC TCATTGA
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Protein sequence | MPPLRRRHRR AIRVPAPFAH LTEPMSLRAF RTLVAIARYR TFARAGEAIG LTQSAVSLQI KTLESEYNVQ LFDRSRRQPV LTEAGNILLA QAKQVLAMVD QIPDALSDEK KLVGRLRIGA IQTALSGPLP DALLALRAAH PSLRVHVSAG MSVELANRVA AGELDAAITT RPVRPHPAEL TWTTLYEDRF WLLAPPGHAE RDAGALLDAL PFIRFDAQAW AGRMIAAELR RIGVRVREEM VLDSAETIAR MVARGLGAAI VALPDATLAR LPPVTRLPFG QPQMGRAVVL LEHQSRPAER FARALAAEVT ASSMRISH
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