Gene Bcen_3892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3892 
Symbol 
ID4095749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1051119 
End bp1052513 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content71% 
IMG OID638017186 
Producthypothetical protein 
Protein accessionYP_623754 
Protein GI107026243 
COG category[S] Function unknown 
COG ID[COG5267] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.321075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCACC CGAACGACTC CACGCCGGCC GCAATCGCGC TGAACCGCTT CGGTCTCGGC 
GCACGCGCCG ACGAAGCGCC GCCCGCCGAT CCGAAAGCGG CACTCGTCGC GCAATTCGAC
CGTTACGACG CACGACCCGC CGCATGGGCC GGCGAACCGG ACGCAATCAC GCTCGCCACG
CGCTTTGCCG ATGCACGCAA CGCGATGAAG AGCGACGACC CCGCCGCGAA GCGCGCGACC
GAGCAATCGA TCCGCCGCGA CGGCTACGAC GCGTATCGCA GCGCCGTCGC CGCGCGCATG
AACAGCGCAT TGACCACGCC CGCGCCGTTC GTCGAACGTC TCGTGCATTT CTGGGCGAAC
CATTTCGCGG TATCGGTCGA CAAGGGGCAG GTGGCCGCGT ACGCGGGCGC ATTCGAACGC
GACGCGATCC GCCCGCACGT GCTCGGTCGT TTCGAGGACA TGCTCGTCGC CGTCGAGCAG
CATCCCGCGA TGCAGGTGTT CCTCGACCAG GCGCGTTCGG TCGGCCCCGA CAGTCCGGCC
GCGCTGCATG CGCAGGCACG CAATCCGGCG GCGAAGCGCG GGCTCAACGA GAACCTCGCG
CGCGAAATCA TGGAACTGCA TACGCTCGGC GTGCGCACCG GCTACACGCA AGCCGACGTG
ACGGAATTCG CGCGCGCATT GACCGGCTGG AGCATCGCCG GCGGGCGCGG GCCGCAACCG
GGCGATGCGG CGCCCGGTGC ATTCGTGTTC CGCCCGAACC TGCACGAACC CGGCACGCGC
ACGGTAATGG GCCGCACCTA CGATCAACCG GGCGAAGCGC AGGCGCGCGC GATCCTGCAC
GACCTCGCGC GATCGGAGGC GACGGGCCGG CACGTCGCGT TTCAGCTCGC CCGTCATTTC
GTCGCCGACA ACCCGCCGCC CGCGCTGACC GACCGGCTCG CGCGCGCGTT CGACACGAGC
GGTGGCGATC TGCCGACCGT CTATCGCGCG CTCGTCGATG CGCCGGACGC GTGGTCGCCG
GTCGACCGCA AGTTCAAGAC ACCGTGGGAG TGGGCCGTAT CGTCGCTGCG CGGGCTCGGC
TGGCGCGACA CCGGTGATCT CAAGGCCGCG CCGCTGCTCG CGCAGCTCGG CCAGCCGGTG
TGGCGGCCGG GCTCGCCGGC CGGCTACGAC GACGTCGCCG CGAGCTGGGC GGCGCCGGAC
GCGCTCGTAC GCCGCGTCGA GATTGCGCAG CGCCTGGCCG CGCGCACGGG CGACCGGCTC
GACCCGCGCA CGCTCGGCAA CACGCTGCTC GCCGGTTCGC TGAGCGCGCC GACCGCGACC
GCGCTCGCGC GCGCCGAAAG CGCGACGACG TCGCTCGCGC TGCTGCTTGT CTCGCCCGAT
TTCCAACGGA GATGA
 
Protein sequence
MDHPNDSTPA AIALNRFGLG ARADEAPPAD PKAALVAQFD RYDARPAAWA GEPDAITLAT 
RFADARNAMK SDDPAAKRAT EQSIRRDGYD AYRSAVAARM NSALTTPAPF VERLVHFWAN
HFAVSVDKGQ VAAYAGAFER DAIRPHVLGR FEDMLVAVEQ HPAMQVFLDQ ARSVGPDSPA
ALHAQARNPA AKRGLNENLA REIMELHTLG VRTGYTQADV TEFARALTGW SIAGGRGPQP
GDAAPGAFVF RPNLHEPGTR TVMGRTYDQP GEAQARAILH DLARSEATGR HVAFQLARHF
VADNPPPALT DRLARAFDTS GGDLPTVYRA LVDAPDAWSP VDRKFKTPWE WAVSSLRGLG
WRDTGDLKAA PLLAQLGQPV WRPGSPAGYD DVAASWAAPD ALVRRVEIAQ RLAARTGDRL
DPRTLGNTLL AGSLSAPTAT ALARAESATT SLALLLVSPD FQRR