Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0945 |
Symbol | |
ID | 4093766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1030490 |
End bp | 1031401 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638014216 |
Product | xylose isomerase-like TIM barrel |
Protein accession | YP_620827 |
Protein GI | 107022500 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.879537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCG CGCTGGACCC TTACATGATT CGCCACCTGC CGCTCGACCG GCTGCCGCAC GCGGTGGCCG AGCTCGGCTA CGACCAGATC GAGCTGTCGC CGCGCAGCGA CTTTCTCGAC TGGTGGGTGA TGCCGCGCGC GACCCGCGAG CGCATGGCCG CATTCCGCCA GGCGATGCGC GCGAGCGGCG TGGGCCTCGC GTCGCTGCAG CCGATGTACC GCTGGGCGAG CCCGTTCGAC GACGAGCGGC AATGGGCGGT GCGCTGCTGG AAGAAGGCGA TCGAGGTGGC AGTCGAGATG GAGTGCCCGC TGATGGTGTC GGAGTTCGGG CGCGGCGCGT CGCCCGAGCG CTCGGTCGGC GAGCGGCCGG GCGCGAACCC GAAGGAGCAG TGCGAGGCCG CGTGGTTCCG CTCGATGGAC GAACTGCTGC CGATCCTCGA GCGCGAACGT ATCGTGCTGT CGGTCGAGCC GCATCCGGAG GACTGGATCG AGCAGTTGCA GCCGGCGATC GACATCGTGA CGAATCTCGG TTCGCCGTCG TTGAAGCTGT CGTATATCGC GCCGCACACG TTCTACTACG GCGACGACAT GGCCGCGATG ATCGCGCAGG CCGCGCCGAT CCTCGCGCAC GTGCGCGTGG CCGACACGTT CGACCACCGC AAGAGCAGCC AGCTGCGCTA CATCGTGAAC CCGCCCGGCT CGAACCAGAT CCGCGTGCAC CAGCATCTCG ACATCGGGCA GGGCGAGATC GACTGGGACG TGTTTTTCCG CGCACTCGGC GCCGCTGGCT TCGATGGCGT GATGTCGTCG TGCGTGTTCG CGTGGGAGGA CCGCGCGGAA GCGTCGTCGC GCTACATGCG CGACGCGATC CAGCGCTACG TCGATCGCCA TTTCGATCGC ACCGCGCGCT GA
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Protein sequence | MKIALDPYMI RHLPLDRLPH AVAELGYDQI ELSPRSDFLD WWVMPRATRE RMAAFRQAMR ASGVGLASLQ PMYRWASPFD DERQWAVRCW KKAIEVAVEM ECPLMVSEFG RGASPERSVG ERPGANPKEQ CEAAWFRSMD ELLPILERER IVLSVEPHPE DWIEQLQPAI DIVTNLGSPS LKLSYIAPHT FYYGDDMAAM IAQAAPILAH VRVADTFDHR KSSQLRYIVN PPGSNQIRVH QHLDIGQGEI DWDVFFRALG AAGFDGVMSS CVFAWEDRAE ASSRYMRDAI QRYVDRHFDR TAR
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