Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6322 |
Symbol | |
ID | 4454090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 508181 |
End bp | 509851 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639698387 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_839947 |
Protein GI | 116686700 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.942942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCATC GAGACACCAA GTCGGTGGAC TACATCGTTG TCGGCGGCGG ATCGACCGGT TGCGTCATCG CCGGACGCCT CAGCGAAGAC GAACGCTCGA GCGTCGCCCT TCTCGAGGAA GGGCCGCGAG ACCGCAGCCC CTATATTCAT ATCCCCGGCG CCTACTACAA GACTGCACAA GGCCCGCTCC TCAAGCGCAT CCCGTGGCAT CCGGCCCAGG GCCACGCCCG CCCCGCAATG CCGACGATGG TCCAGGCCAG CGTGCTTGGC GGTGGAAGTT CCGTGAACGC GATGATCTAC ATCCGTGGCG TCCCGTCGGA CTACGACCAG TGGCGAGATT CCGGCGCGAC CGGCTGGGGC TTCGATGACG TCCTGCCCTA CTTCAAACGC TCGGAAGACA ACGAGCGCTT CTGCAACGAC GTCCACGGCA CCGGCGGCCC GCTGCGCGTG TCCGACATCC CGCATATTCA TCCGTTGACC AAGGCATGGC TCAAGGCCTG CCAGCAATCC GGCTTGCCGT ACAACGAGGA TTTCAATAGC GGGCATCCGG CCGGCTGCGG CCTTTATCAG ATCACCGCAC GCGATGGCCG TCGCAGCAGC GCTGCCGTCG CCTACATTCA TCCGGCGCTG AATCGCCCCA ACCTGACGGT CCGTACCGGC GTGCGGGTCA CGCGAATTCT GATCGAAAAA GGCCGTGCAG TCGGTGTCGA ATTCCGGCGA AACGGGCGCA TCGAGCAGAT GCGGGCGAAT CGCGAAGTCA TCGTTTCGGC GGGTGCGCTC AGTACCCCGA AGCTGCTGAT GCTGTCCGGG ATCGGACCGT CCGCGGCGTT GCAAAGACAT GGAATTGCCG TCGAACAGGA CCTCCCCGGC GTGGGCCGGA ATCTTCAGGA CCACATCGAA ATTTCGCTCG TCTACCAGTT GAACGGACCG TATAGCTACG ACAAATACAA GAAGCCGCAC TGGAAGGCGC TGGCGGGGCT GAACTATCTG TTGTTCAGGA ACGGGCCGGC CGCGTCCAAC CTGATCGAGG GCGGCGCGTT CTGGTGGGGC GACAAGGAAG CCTTGACGCC CGACATTCAA TATTTCCTCG TGGTCGGCGC CGGAATCGAA GAAGGCGTCG ACAGCGTGCC GGGAGGCAAC GGCTGCACCA TCAATCTCGG ACAGATCCGC CCTCGCTCGC GCGGCTTCGT CGAGCTGTCG AGCCCCGATC CGATGGATGT CCCGCGAGTG TTCCCCGAGT ACTTCAGCGA TCCGTACGAC CTCGAAGCGG TGGTCGACGG TTGCGAAAAG GCGATCGACA TCATGGGACA GCCCGCGATC GGCAAGTACA TCGCGCAACG GATCGTACCG GGCAAACAGG CAGCCAGTCG CGACGAACTG AGGAAATTTG TCCAGCAGGA GGCGCACGCC GCGCTTCACC CTTGCGGAAC TTGCCGCATG GGCACCGATA GCGACTCCGT GGTGGACCCT TCGCTACGCG TACACGGTAT CGACGGACTG AGAGCGGCGG ACGCGTCGAT CATGCCGAAC ATCATTTCGG GCAATCTCAA CGCCGTCTGC ATCATGATCG GCGAAAAGGC AGCGGACCTC ATCCTGGGCA AGGCGCCGCT GACGCGCATC GGGCACGCAT CCGTTCCGAT CGATTCCGAA GCGTCTCGAG TCACTTCGTG A
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Protein sequence | MTHRDTKSVD YIVVGGGSTG CVIAGRLSED ERSSVALLEE GPRDRSPYIH IPGAYYKTAQ GPLLKRIPWH PAQGHARPAM PTMVQASVLG GGSSVNAMIY IRGVPSDYDQ WRDSGATGWG FDDVLPYFKR SEDNERFCND VHGTGGPLRV SDIPHIHPLT KAWLKACQQS GLPYNEDFNS GHPAGCGLYQ ITARDGRRSS AAVAYIHPAL NRPNLTVRTG VRVTRILIEK GRAVGVEFRR NGRIEQMRAN REVIVSAGAL STPKLLMLSG IGPSAALQRH GIAVEQDLPG VGRNLQDHIE ISLVYQLNGP YSYDKYKKPH WKALAGLNYL LFRNGPAASN LIEGGAFWWG DKEALTPDIQ YFLVVGAGIE EGVDSVPGGN GCTINLGQIR PRSRGFVELS SPDPMDVPRV FPEYFSDPYD LEAVVDGCEK AIDIMGQPAI GKYIAQRIVP GKQAASRDEL RKFVQQEAHA ALHPCGTCRM GTDSDSVVDP SLRVHGIDGL RAADASIMPN IISGNLNAVC IMIGEKAADL ILGKAPLTRI GHASVPIDSE ASRVTS
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