Gene Bcen2424_5675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5675 
Symbol 
ID4452171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2795162 
End bp2795758 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID639697736 
Producttoluene tolerance family protein 
Protein accessionYP_839301 
Protein GI116693768 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0652085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00685344 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGTC ATCTGTTTGC TTTCGTCGCG GCGGCCGCCG TGTCGGTTTC CGCTTTCGCG 
CAGAGCGCGC CGGTCGATGT CGTCCGCACG GCGGTCGAGG GTACCGTCAA TGCGATGAAG
GCCGATCCGG CCGCGCGCGG CGGCGACATG GCGAAGATCA CGCAGGTCGT CGAGCAGCGC
TTCCTGCCCG TGACCAACTT CGAGCGCACG ACCCGCATCG CGGTCGGCGA CGCGTGGAAG
CAGGCCACGC CGCAACAGCA GCAGGAACTG TACAAGCAGT TCCGCTTGCT GATGACGCGC
ACCTACGCCG CGTCGCTCGC GCAGCTCGGC AACCAGGACG CGAAGTTCTC GTTCAAGCCG
GGCGGCGCGT CGGGCGCGGA CGCGCTCGTG CAATCGACGG TGACGACGCC GGGCGACAGC
CAGTCGGTCG GCTATCGTCT CGGCAAGGTC GGCAACGACT GGAAGATCTA CGACATCGAC
ATGTCGGGTG CGTGGCTGAT CCAGGTCTAT CAGGGTCAAT TCAAGAGCCA GCTCGCGACG
GGCGGGATCG ACGGCCTGAT CGCGTATCTG CAGAAACACA ATTCGCGGAC GAACTGA
 
Protein sequence
MKRHLFAFVA AAAVSVSAFA QSAPVDVVRT AVEGTVNAMK ADPAARGGDM AKITQVVEQR 
FLPVTNFERT TRIAVGDAWK QATPQQQQEL YKQFRLLMTR TYAASLAQLG NQDAKFSFKP
GGASGADALV QSTVTTPGDS QSVGYRLGKV GNDWKIYDID MSGAWLIQVY QGQFKSQLAT
GGIDGLIAYL QKHNSRTN