Gene Bcen2424_3829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3829 
Symbol 
ID4451768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp694650 
End bp695816 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content70% 
IMG OID639695887 
Productglycosyl transferase, group 1 
Protein accessionYP_837459 
Protein GI116691926 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00562518 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACT CTTCCCGGCC GATCAAATCG TTGCAGATCG GCATGCACTG GTTTCCCGAA 
CGCGCGGGCG GCCTCGACCG GATGTACTAC TCGCTCGTCG GCGCGCTGCC CGGCGCGGGC
GTCGAGGTGC GCGGGCTCGT GGCCGGCTCG CCGAAGGTCG CCGACGACAC GGGCGGGGCG
ATCCAGGGTT TCGGTCCCGC GTCGGAGCCG CTCGCGCGCC GGATGCTCGC CGCGCGGCGA
GCGTTGCGCG ACGAGATCCG CAGCGCGCGG CCGGACGTGA TTTCGTCGCA CTTCGCGCTG
TATACGTTCC CGGGCCTCGA CGTGACGCGC GGGATTCCGC AGGTGTCGCA CTTCCAGGGG
CCGTGGGCCG ACGAAAGCCA GGTCGAGGGC GCCGCGTCGC TCGGGCAGCG CGCGAAGCGC
TATCTCGAGC AGGCGGTGTA TACGCGCTCG TCGCGGCTGA TCGTGCTGTC GCAGGCGTTC
GGCCAGATCC TGACGAACCG GTACGGGATC GATCCGTCGC GCGTGCGCGT GATTCCCGGC
TGCGTCGATA CCGCGCAGTT CGACACGCCG CTCACGCCCG CCGAGGCGCG GCACAAGCTG
CAACTGCCGC AGGACCGGCC GATCGTGCTG GCCGTGCGCC GACTCGTGCG GCGCATGGGG
CTGGAGGACC TGATCGATGC GATCGGCATC GTCAAGCGCC GCCACCCGGA CGTGCTGCTG
CTGATCGCCG GCAAGGGCAA GATCGGCGAG GAACTGCAGC AGCGCATCGA CGAAGCCGGG
CTGCAGGACA ACGTGAAGCT GCTCGGCTTC GTGCCCGATC ACCATCTCGC GGCGCTGTAC
CGTGCGGCGA CGGTCAGTGT CGTGCCGACG GTCGCGCTCG AGGGCTTTGG GCTGATCACG
GTCGAATCGC TGGCGTCCGG CACGCCGGTG CTGGTCACGC CGGTCGGCGG GCTGCCGGAG
GCGGTCGCCG GGTTGTCGAA CGATCTCGTG CTGCCGTCGA CGGGCGCGGA TGCAATTGCC
GAAGGGCTCG GCGGCGCGCT GTCGGGTGCG ATCGCGCTGC CCGATGCGGC CGCATGCAAG
CGTTATGCAC GCGATCATTT CGACAATGCG GTGATCGCGC GGCGCGTGGC CGGCGTGTAC
GAAGAGGCGA TCCAGGCGGC AGGTTGA
 
Protein sequence
MSHSSRPIKS LQIGMHWFPE RAGGLDRMYY SLVGALPGAG VEVRGLVAGS PKVADDTGGA 
IQGFGPASEP LARRMLAARR ALRDEIRSAR PDVISSHFAL YTFPGLDVTR GIPQVSHFQG
PWADESQVEG AASLGQRAKR YLEQAVYTRS SRLIVLSQAF GQILTNRYGI DPSRVRVIPG
CVDTAQFDTP LTPAEARHKL QLPQDRPIVL AVRRLVRRMG LEDLIDAIGI VKRRHPDVLL
LIAGKGKIGE ELQQRIDEAG LQDNVKLLGF VPDHHLAALY RAATVSVVPT VALEGFGLIT
VESLASGTPV LVTPVGGLPE AVAGLSNDLV LPSTGADAIA EGLGGALSGA IALPDAAACK
RYARDHFDNA VIARRVAGVY EEAIQAAG