Gene Bcen2424_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3287 
Symbol 
ID4453748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp127675 
End bp128526 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID639695351 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_836924 
Protein GI116691391 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCGA TGCCCGTGTC CCGCTGGGGA CGTCCCGCCC GTTGGTTGTA CCGGCTGTCG 
CTGCCGTGCG CGCTCGCGCT GTGGCTCGTG CCGCTGCTCG CGGTGCTCGT CACGTCGATC
CGCTCGACCG ACGAGATCAT CGCCGGTCAT TACTGGGACT GGCCGAAACA GTTTGCGCTG
CTGGACAACT ACGGCGCCGC GCTCGCGCAG ACGCCGATGC TGCATTACTT CGCGAACAGC
GTTCTGATCA CGGTGCCGTC CGTCGCCGCA TCGATCCTGC TCGCGTCGCT CGCCGGGCAC
GCGCTCGCGA ACTTCCGGTT CCGCGGCAAC CTCGTGCTGC TCGGGCTGTT CGTCGCCGGC
AACTTCGTGC CGATCCAGAT TCTGATGATC CCGGTGCGGC AGATCATGCT CGGCGTCGGT
CTCTACAACA CCGTGTGGGC GCTCGTGCTG TTCCATACCG CGTTCCAGAC CGGCTTCTGC
ACGCTGTTCC TGCGCAACTT CATCCGCGAG CTGCCGTTCG AGCTGATCGA GGCCGCGCGC
GTCGAAGGCG CGTCCGAGTG GGCGATCTAC TGGCGCGTCG TGCTGCCGCT CGTGCGGCCG
GCGCTCGCCG CGCTCGCGAT CCTCGTGTTC ACGTTCGTGT GGAACGACTA CTTCTGGGCA
CTGTGCCTCA CGCAAGGCGA CGACGCGGCG CCGATCACCG TCGGCGTCGC CGCGCTCAAG
GGGCAGTGGA CGACCGCCTG GAACATCGTG TCGGCCGGCT CGGTACTCGC CGCGCTGCCG
TCGGTCGCGA TGTTCTTCGC GATGCAGAAG CATTTCGTCG CGGGGCTCAC TTTCGGCGCG
ACGAAGGGCT GA
 
Protein sequence
MYPMPVSRWG RPARWLYRLS LPCALALWLV PLLAVLVTSI RSTDEIIAGH YWDWPKQFAL 
LDNYGAALAQ TPMLHYFANS VLITVPSVAA SILLASLAGH ALANFRFRGN LVLLGLFVAG
NFVPIQILMI PVRQIMLGVG LYNTVWALVL FHTAFQTGFC TLFLRNFIRE LPFELIEAAR
VEGASEWAIY WRVVLPLVRP ALAALAILVF TFVWNDYFWA LCLTQGDDAA PITVGVAALK
GQWTTAWNIV SAGSVLAALP SVAMFFAMQK HFVAGLTFGA TKG