Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1710 |
Symbol | |
ID | 4449238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1901997 |
End bp | 1903871 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639693755 |
Product | extracellular solute-binding protein |
Protein accession | YP_835355 |
Protein GI | 116689732 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTGT TGAAATGGCG ATGGGCAGGC GTGCCGCGCG CGGCGCTGTT CGCGTGCGCC GTGCTGCTCG TGTCGGGTAG CGCCATGCCA CGTGCGGCGC TCGCGGTGTC GGCGATCGCG CAATACGACC AGCCCAAGTA CCTGGCCAAT TTTACGCATT TCGATTATGC CGATCCCGAC GCGCCGAATG ACGGCACGCT CAACTTCGAA AACTACGACG AAGCACAGAG CTACGACTCG CTGAACCCGT TTCTGACCCG CGGCTCGCCC GCGCCGGACA TCAAGAACCT GATGTTCGAC ACGCTGATGC AGCGCAGCTG GGATGAACTC GCGTCCGAAT ACGCGCTGAT CGCCGACGAC GTCGAGGTGG CGGCCGACGG GCTGTCCGCG ACGTTCCACA TCAATCCGGC CGCGCGCTTT TCGAACGGCG ACGCAATCAC CGCGGCTGAC GTCAAGTATT CGTTCGATAC GCTGACGAGC CCGCAGGCGT CGCCGCTGTA CAACGCGCAA TTCTCGATCA TCAAGCGCGC GGTGGTCGTC GACAGCCACA CGATCCGCTT CGAGTTCAAG CACGCGGAGC GCGACGCCGC GCTGATCGCA GGCGACCTGC CGGTGTTCTC GCCGAAGTGG GGGCAGCGCG CGGACGGTAC GCGGCCGCCG TTCGACCAGA TCGCGAACGA GCCGCCGATC GCGAGCGGCG CGTACCTGAT CGAGCAGCGC AGGAACGACA AGCAGATCGC GTACGTGCGC AACCCGCACT ACTGGGCCGC GAATCTGCCG TCGCGGCGCG GGATGTTCCG TTTCGCGCGC GTGTCGTTCA AGCTGTACCT CGACCAGTAC ACGGCGCTCG AGGCGTTCAA GGCCGGCGAT GTCGACGCGC GGATGGAGTA CAGCTCGACG CAGTGGGCGC GCAAGTACGT CGGCAAGAAT TTCAGCAACG GCATGCTGAA GAAGGGGGAA TTCCCGGACG GCCCCGCGCA GATGCAGGGC TTCCTGATGA ACCTGCGCAA ACCGATGTTC CAGGACGTGC GCGTACGGCA TGCGCTCGCG CTGGCGTTCG ACTTCGACTG GATGAGCCGG ATGATGTTCT ACGGACAGTA CCGCCGCACC AACAGCTTCT GGGACGCGAG CCCGTTCGCC GCGTCCGGCA TGCCGAGCGC GAAGGAGCTC GCGCTGCTCG AACCGTACCG CTCGACGCTG CCGCCGGAGG TGTTCGGGCC GATGGTCAAG CAGCCGTCGA CGCTGCCGCC GGGCTCGCTG CGCGCGAACC TCAGGCAAGC GCGCGACTTG CTCGCGCAGG CCGGCTGGCA TTATCGCGAC GGCGCGCTGC GCGACGCGAA CGGCACGCCG ATGACGATCG AGATCATCGA CGACCAGCCC GGCATGGATC GCCTGATCCT GCCGTACACG CAAGCGCTCG CGACGCTCGG CATCCATGCG TACCTGCACG AGATCGACAG CGCGCTCTAC CAGAAGCGGC TCGACAATTT CGAGTACGAC ATGACGACGT ATATCTACTC GCCCGTGACA ATTCCCGGCG CGGAGCTGAC GCGCCGTTTC GGCAGCGCGG CTGCCTCGCA GCCCGGCTCG GAGAACTATC CGGGCGTGAA GTCGAAAGCC GTCGATGCGC TGATCCGCGC GGCGCTCGCG GCGAATACGC TCGACGATCT CGAGACGGCC ACGCACGCCC TTGATCGCGT GCTGATCAAC CTGTACGTAC TGGTCCCGCA GTACTACATG CCGAACGCGC GGATCGCGTA CAAGACGACC CTCGGTCATC CGGCGGTCGT GCCGGCTTCC TATCAGTACG AGGACTGGAT CGTCGACTAC TGGTACGGGA AGCGGCCGGC GGTCCAACCC GCTCCGGCGG CCTGA
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Protein sequence | MKLLKWRWAG VPRAALFACA VLLVSGSAMP RAALAVSAIA QYDQPKYLAN FTHFDYADPD APNDGTLNFE NYDEAQSYDS LNPFLTRGSP APDIKNLMFD TLMQRSWDEL ASEYALIADD VEVAADGLSA TFHINPAARF SNGDAITAAD VKYSFDTLTS PQASPLYNAQ FSIIKRAVVV DSHTIRFEFK HAERDAALIA GDLPVFSPKW GQRADGTRPP FDQIANEPPI ASGAYLIEQR RNDKQIAYVR NPHYWAANLP SRRGMFRFAR VSFKLYLDQY TALEAFKAGD VDARMEYSST QWARKYVGKN FSNGMLKKGE FPDGPAQMQG FLMNLRKPMF QDVRVRHALA LAFDFDWMSR MMFYGQYRRT NSFWDASPFA ASGMPSAKEL ALLEPYRSTL PPEVFGPMVK QPSTLPPGSL RANLRQARDL LAQAGWHYRD GALRDANGTP MTIEIIDDQP GMDRLILPYT QALATLGIHA YLHEIDSALY QKRLDNFEYD MTTYIYSPVT IPGAELTRRF GSAAASQPGS ENYPGVKSKA VDALIRAALA ANTLDDLETA THALDRVLIN LYVLVPQYYM PNARIAYKTT LGHPAVVPAS YQYEDWIVDY WYGKRPAVQP APAA
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