Gene Bcav_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3840 
Symbol 
ID7860580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4258631 
End bp4259047 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content68% 
IMG OID643867944 
Producthypothetical protein 
Protein accessionYP_002883844 
Protein GI229822318 
COG category[S] Function unknown 
COG ID[COG5649] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.384787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA AGAAGCAGGC ACGACCGAAG CTGCTCTCGG GCGGCAACCC GCAGATCCCC 
AAGGGCGACG GGAACGGCCC GGTGCAGGAC TACCTCGACG CGATGCCCGG CTGGAAACGC
GACGTCGGGC GGCGCCTGGA CGACCTGGTC GTGAGCACCG TGCCCGACGT CAACAAGGCG
GTCCGGTGGA ACCAGCCGTT CTACGGACTC GACGGCTGGT TCCTGTCGTT CCGGTGCTAC
ACGGACTACG TCCAGGTGCA GTTCCTCACG GGCACGTCGC TCGATCCGAT GCCCCCGAAG
GACTCCAAGC ACGCGGACAT GCGCTACCTC GACATCCGGG AGGACGACGA GGTGGACGAG
GGCCAGCTCC GGTCCTGGAT CGAGCAGGCC GGCAAGCTGC CGGGCGAGCC CTTGTGA
 
Protein sequence
MTAKKQARPK LLSGGNPQIP KGDGNGPVQD YLDAMPGWKR DVGRRLDDLV VSTVPDVNKA 
VRWNQPFYGL DGWFLSFRCY TDYVQVQFLT GTSLDPMPPK DSKHADMRYL DIREDDEVDE
GQLRSWIEQA GKLPGEPL