Gene Bcav_3349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3349 
Symbol 
ID7860315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3722268 
End bp3723251 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content76% 
IMG OID643867449 
Productoxidoreductase domain protein 
Protein accessionYP_002883354 
Protein GI229821828 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.773836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCA TCGCCGTCGC CGGCATGGCG CACCCCCACG CCGCCTACGT GCTCGACGAG 
CTGGCGCACG GGCCGTACGA GCTCGTCGGC ACGAGCGACC CCGACCCCGC GAACCGCGAA
CGCTGGACGC CGCAGGGGGT GCCCAGCTAC GCGGACCACC GGGAGCTGCT CGCCGCTCAC
GCGCCGGACG TCGTCGCCGC GTTCGGGGTG TACGGCGCCC GGGCGGCGAT CGTGATCGAC
GCCCTCGACG CCGGGGCGCA CGTCGTCGCC GACAAGCCGT TGTGCACGGA CCAGGCCGAC
CTCGACGCGA TCGAGCGGGC CGCCGCGCGG GCGGACCGGC ACGTGTCCGT CGTGTTCGAG
AAGCGGTGGC ACCCGGTGAC GCTCGCGGCC CGCAGGCTCG TCGGCGAGGG GGTGCTCGGC
GACCTCGCCC TCGTCGCGGC GACCGGTCCG CACAAGCTCC TCGCCCCGAC GCGGCCGCCG
TGGTTCTTCT CGGCCGACGG GTACGGCGAC CTCCTCGGGG ACCTGCCGGT CCACGACATC
GACCTCGTGC TCGAGCTCAC GGGAGCCCGG TCGGGCACCG TGAGCGGGAT CGCGGGGCGG
CGTCCGCTCC CCGACCACCC CGGATGGACC GACAGCGGTG CCCTCGTGCT CGCCGCCGGC
GACGTCGCCG CGACGATCGA GGCGCACTGG CTGTGGCCCG AGGCGTCCGA CGTGCACGGG
CACTACCGGA TGCGGCTCAC CGGCACCCGA GGTGTCGCCG AGCTGGACTG GGCGCGGTCC
CGCCTCACCG TCCTCACGCA CGAGCGGGAG CCCTGGGACG AACCGTTGGG GCCGGGACTC
CGGCCGGCCG AGCAGGCCCT TTCGGCACTG GCCGAGGGGC GGGCTCCCGA GGTCACGACC
CAGGCGAGCG TGCTCGCGAC CCGGGTGGCG CTCCTCGCTG CGCGCAGCGC GCGCGACGGC
GGACGTGCGG AGCGGTGGGG ATGA
 
Protein sequence
MMRIAVAGMA HPHAAYVLDE LAHGPYELVG TSDPDPANRE RWTPQGVPSY ADHRELLAAH 
APDVVAAFGV YGARAAIVID ALDAGAHVVA DKPLCTDQAD LDAIERAAAR ADRHVSVVFE
KRWHPVTLAA RRLVGEGVLG DLALVAATGP HKLLAPTRPP WFFSADGYGD LLGDLPVHDI
DLVLELTGAR SGTVSGIAGR RPLPDHPGWT DSGALVLAAG DVAATIEAHW LWPEASDVHG
HYRMRLTGTR GVAELDWARS RLTVLTHERE PWDEPLGPGL RPAEQALSAL AEGRAPEVTT
QASVLATRVA LLAARSARDG GRAERWG