Gene Bcav_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2880 
Symbol 
ID7860411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3216232 
End bp3216945 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content74% 
IMG OID643866977 
ProductDNA alkylation repair enzyme 
Protein accessionYP_002882887 
Protein GI229821361 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000948071 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCCTCG CGGACGAGGT GGTCGCACAG ATCGCCTCGG CCGCCGACGC CGACGTGGCG 
TCGCAGCTCG CGCGGTACTT CCAGGTGCGT CCCGGCGGGT ACGGCGAGGG CGACGTGGTC
GTCGGGGTCC GGCTCGGCGA GCTGCGCCGG ATCGCGCGCC CGTACGCCCG GCGACCCTTC
GACCCCGACG ACTGGCTCCC CCTCCTGCGC AGCGCCGTGC ACGAGCACCG CCTGCTGGCC
CTCGTCGCGA TGGCGACCCG CTCCGGCGTC GGCGACGAGA TCGAGCGCAC CTTGATCACC
CGGACGTACC TCGCGAACAC CGCGCACGTG AACGGCTGGG ACCTCGTCGA CGCGTCCGCG
GCGCCGATCC TCGGGCGGTA CGTGCGGGAC CACGACCGCA GCGTGCTCGA CGAGCTCGCC
CGGTCGGAGT CCGTGTGGGA GCGGCGCATC GCGATCGTCA GCACCCACGC GCTCATCCGC
GCGGGCGAGA GCGCCGACAC GTTCCGCATC GCCGACGCCC TCCTCGACGA CCCGCACGAC
CTCATCCACA AGGCGACCGG CTGGATGCTG CGCGAGGTGG GCGCCCGCGT GTCGCAGGAC
GCGTTGCGCG CCTACCTCGA CGACCGGGCG CCGCGGATGC CACGCACCGC GCTGCGCTAC
GCCGTCGAGC ACCTCGACGC CGACGAACGG CGGCACTACC GCGCGCTGCG CTGA
 
Protein sequence
MTLADEVVAQ IASAADADVA SQLARYFQVR PGGYGEGDVV VGVRLGELRR IARPYARRPF 
DPDDWLPLLR SAVHEHRLLA LVAMATRSGV GDEIERTLIT RTYLANTAHV NGWDLVDASA
APILGRYVRD HDRSVLDELA RSESVWERRI AIVSTHALIR AGESADTFRI ADALLDDPHD
LIHKATGWML REVGARVSQD ALRAYLDDRA PRMPRTALRY AVEHLDADER RHYRALR