| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2706 |
|---|
| Symbol | |
|---|
| ID | 7860144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3008239 |
|---|
| End bp | 3009009 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643866803 |
|---|
| Product | LmbE family protein |
|---|
| Protein accession | YP_002882713 |
|---|
| Protein GI | 229821187 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.871669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG ACACGCCGAC GCCGACAGAA CCCCTGCGAG CGCTGCGCGA GGACTGGGAG
CGAGCCCTCG CCGTCGTCGC CCACCCCGAC GACATGGAGT TCGGGGGCTC CGCCGCGGTG
TCGCGGTGGA CGCGCCAGGG CAAGCAGGTG GCCTATCTCC TCCTGACGAG CGGTGAGGCC
GGGATCGACG GGATGCACCC GGACGAGGCG CGGGTCGTGC GGGAGGCGGA GCAGCGGGCG
TCGTGCGCCG TCGTGGGCGT GAGCGACGTC GAGTTCGCCG GGCTGGACGA CGGCGTCCTG
GAGTACGGGC TCCCGATGCG GCGGGTGATC GCCGAGGCGG TCCGCCGGCA CCGGCCGGAC
ATCGTCATCA CCGGCAACTT CCACGACTCC TGGGGCCCCG GTTCGGCACC GAACCAGGCC
GACCACATCG CGACCGGACG GGCGGTGCTG GACGCCGTCC GGGACGCGGG CAACCGGTGG
GTCTTCCACG ACCAGCTCAC GGACGGGCTC GAGCCGTGGG GTGGCGTGAG CGAGGTGTGG
GTGGCGGCGT CGCCGTTCTC CCGGCACGGC GTGGACGTGA CCGAGACGTT CGACGACGGC
GTCGCGTCCC TCGCGGAGCA TCGCGCCTAC ATCGAGGGGC TGGGCTGGGC GGACTTCGAC
CCGGAGGAGT TCCTCGGGGG GTTCGCGCGG GCAGCGGGGG AGCGCCTCGG CGTGGGCTAC
GCGGTCGCGT TCGAGCGTGT CTCCCTGGCG TGGGGCGACG CCGAGGACTG A
|
|---|
| Protein sequence | MSTDTPTPTE PLRALREDWE RALAVVAHPD DMEFGGSAAV SRWTRQGKQV AYLLLTSGEA
GIDGMHPDEA RVVREAEQRA SCAVVGVSDV EFAGLDDGVL EYGLPMRRVI AEAVRRHRPD
IVITGNFHDS WGPGSAPNQA DHIATGRAVL DAVRDAGNRW VFHDQLTDGL EPWGGVSEVW
VAASPFSRHG VDVTETFDDG VASLAEHRAY IEGLGWADFD PEEFLGGFAR AAGERLGVGY
AVAFERVSLA WGDAED
|
|---|
| |