Gene Bcav_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2406 
Symbol 
ID7858959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2692425 
End bp2693210 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content77% 
IMG OID643866502 
Productprotein of unknown function DUF152 
Protein accessionYP_002882418 
Protein GI229820892 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.270462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGG CCGACGGCGT CATCGACGTC ATCGAGTGCG ATCTCGGCCC GGCGGTGCGG 
GCGTTCTTCA CGACCCGTGC CGGCGGGCTG AGCGCTGCGC CGTACGCCAG CCTGAACCTC
GGACTGGGCG TCGCCGACGA CGAGCGGGCG GTCCGGGCGA ACCGGCTGCG GGTGGCGGAG
CTCCTCGGCG CACCTGTGGC GTTCGCCACC CAGGTGCACG GGCCCGACGT CGCCGAGGTG
GACGCCGGCG CGGATGTCCG GGCCGGGAGC GTGGCTGTCG CCGACGCCCT CGTGACCCGG
CGCACCGACA TCGGGCTCGG CGTGCTCGTC GCAGACTGCG TCCCGGTGCT GATCGCCGCG
ACGGGCCCCG ACGGAGCACC CGTGCTCGCG ACGGCGCATG CCGGCCGTGC GGGCCTGCTC
GCGGGCGTCG TGGGCGCCAC GGTGGCGGCG GTGCGCTCGC GCGGCGGCGG CGACCTGAGG
GCGGTCGTGG GTCCCGCGAT CTGCGGCCGG TGCTACGAGG TGCCGGAGTC GATGCGCGAC
GAGGTGGCGG AGGCGTACCC GGCCGCGCGC GCCACGACGT CCTGGGGGAC GCCGTCGCTC
GACCTGCCGG GCGCCGTCGT GACCGGGCTC ACGGCGGACG GGGTCGACGT GGTCCGCGTC
GACGTCTGCA CACGGGAGGA CGCCGCGATG TTCTCGCACC GGCGCGACGG CGTCACCGGC
CGGAGCGCCG GCGTGATCGC GACACGCCGC AGGGTGGTGC ACTCCCGGGA CGGTGGCCTG
GGCTAG
 
Protein sequence
MSPADGVIDV IECDLGPAVR AFFTTRAGGL SAAPYASLNL GLGVADDERA VRANRLRVAE 
LLGAPVAFAT QVHGPDVAEV DAGADVRAGS VAVADALVTR RTDIGLGVLV ADCVPVLIAA
TGPDGAPVLA TAHAGRAGLL AGVVGATVAA VRSRGGGDLR AVVGPAICGR CYEVPESMRD
EVAEAYPAAR ATTSWGTPSL DLPGAVVTGL TADGVDVVRV DVCTREDAAM FSHRRDGVTG
RSAGVIATRR RVVHSRDGGL G