Gene Bcav_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1984 
Symbol 
ID7858604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2264027 
End bp2264572 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content75% 
IMG OID643866078 
Producthypothetical protein 
Protein accessionYP_002882001 
Protein GI229820475 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.470918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00979887 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACTG AGGTGATGAT CGCGATCGCC GTCGGCCTGG TCCTCGTGCT CGTCTGGGTG 
GCGATCGGGG CGGCGAACCG GCTCGACCGG CTGCACCAGA AGGTCGCCCG GACCGGCGCC
ACGCTCGACG CACAGCTCCT GCGCCGCGCC GCGGCCGCCG CCGAGCTCGC AGCCACCGGC
CGGCTGGACC CGGCGAGCTC GCTGGTGGTG GCAGAGGCTG CGGCGCGGGC GCTCGAGGTC
GGCCAGTCCG ACGACGACGA CCCGCTCACC CCGGAGCGCG GCCTCGCGGA GAGCGAGCTG
TCCCGCGCGC TCCGCCAGGC TCTCGGCGTC ACCGGCCCGG CGCAGGACGG GACGTCGGCA
CCCGACGACG CCACGAGCAC GCTCGAGCAG TGCTGGCACC GCAGCCAGCT CGCGCGCCGG
TTCTACAACG ACGCCGTGGC CCAGGCGCGC CGGATGCGCG TGCAGGTCGT CGTCCGCGCG
CTCCACCTCG CGGGGCGCGC CAGGATGCCG GTGACGTTCG AGATGGACGA CGCCACCGAG
CGCTGA
 
Protein sequence
MTTEVMIAIA VGLVLVLVWV AIGAANRLDR LHQKVARTGA TLDAQLLRRA AAAAELAATG 
RLDPASSLVV AEAAARALEV GQSDDDDPLT PERGLAESEL SRALRQALGV TGPAQDGTSA
PDDATSTLEQ CWHRSQLARR FYNDAVAQAR RMRVQVVVRA LHLAGRARMP VTFEMDDATE
R