Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1896 |
Symbol | gabD2 |
ID | 7858289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2158880 |
End bp | 2160457 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643865987 |
Product | succinic semialdehyde dehydrogenase |
Protein accession | YP_002881914 |
Protein GI | 229820388 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0774161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000854117 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGCGA GCACGGACCG GACGGACCTC GTCCTCCCGC ACACCCTCAC GGGCGCGCGG CTGCGCGCGC TCGCCGGGGG GATCGCCGCC ACCGGACCCG CCGCGGACGT CGAGGCGCCG TTCACCGGCG CGCTGCTGAC CCGGCACGCC TCGTCCACCA CGGCGGACGT CGACGCCGCG GCCGACCGAG CGCGATCAGC CGCCGGACGC TGGGCAGCCA CCCCGGTCCG GGAGCGCGCC CGCGTGCTGC TGCGCCTCCA CGACCTCCTG CTGGACGAGA TCGACCCCCT GCTCGACCTG GTCCAGGCGG TCACCGGCAA GGCCCGCGGG CACGCGCTCG AGGAGCTGCT CGACGTGGTG AACGTGTGCC GCTACTACGC GCGCACCGGG CCGCGGACCC TCGCTCCGCA CCGCCGCGCC GGTGCGATCC CCGTGCTCAC CCGGACCACG GAGCTGCGCC ACCCGGTCGG GCTGGTGGGC CTCGTCACTC CGTGGAACTA CCCGCTCGCG CTCGGCGTCT CCGACGCGCT GCCGGCGCTC CTCGCCGGGA ACGCCGTGCT GCACAAGCCG GACACCCGCA CCGCGCTCGT CACGCTCGCC GGCCGGGAGC TCGCCGTCGC CGCCGGGCTG GACCCCGACC TCTGGCAGGT GGTGGTCGGC GACGGCGCGG TGGTCGGGAA CCGCGTCACC GACCTCGTGG ACCACATCTC GTTCACGGGT TCCACGCCCA CCGGGCGGGT GGTCGCGGCG CGGGCGGCCT CACGACTCAT CGGGGCCACG CTGGAGCTCG GCGGGAAGAA CCCCATGATC GTGGCGCCCG ACGCCGACCT CGCGGCCGCC GTCGCCGGCG CCGTCCGCGG CAGCTTCTCC TCGAGCGGGC AGCTCTGCAT GTCCATCGAG CGCATCTACG TGCACCGCTC GATCGCCGAG ACCTTCACCC GCGAGCTCGC CGCGGCCACG CGCGACCTCC GGGTCGGCGC CGACTACTCG TACGCGTACC AGATGGGCTC GCTCGTCTCC GCCGACCAGC TCGAGCGGGT CTCCGCGCAC GTCGACGACG CCGTCGCGGC CGGTGCGCGG GTGCTCGCAG GCGGGCGTCC GCTCCCGGAG CTCGGACCGT ACTTCTACGC GCCGACGGTG CTCGCGGACG TGCCGCCCAC CGCTCGCGCC TACCGGTCCG AGACGTTCGG CCCGGTGGTC TCCGTGTACC CGGTGGACTC CCTCGACGAC GCCGTGCGCG CCGCCAACGA CTCGGAGCTC GGCCTCAACG CGTCGGTGTG GTCGCGCGAC ACACGGCGGG CGCGCGCCCT CGCCGCACGG CTGCGCGCGG GTTCGGTCAA CGTCAACGAG GCGTACACGG CGGCGTGGGG CTCCATGGAC GCGCCGAGCG GCGGATGGGG TGACTCGGGC CTCGGGCGCC GGCACGGGAC GGCCGGTCTC CACGAGGTCA CCTGGGCCCA GACCGTCGCG CACCAGCGCG TGTGGCCGAT CGGCGAGCAC GGCCCGCTCA CCGGGCGCCG CTACCAGGGC GTGATGACGA CGGCGCTGCG TGCGCTGCGC GTCGTCGGCC GGCGGTGA
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Protein sequence | MPASTDRTDL VLPHTLTGAR LRALAGGIAA TGPAADVEAP FTGALLTRHA SSTTADVDAA ADRARSAAGR WAATPVRERA RVLLRLHDLL LDEIDPLLDL VQAVTGKARG HALEELLDVV NVCRYYARTG PRTLAPHRRA GAIPVLTRTT ELRHPVGLVG LVTPWNYPLA LGVSDALPAL LAGNAVLHKP DTRTALVTLA GRELAVAAGL DPDLWQVVVG DGAVVGNRVT DLVDHISFTG STPTGRVVAA RAASRLIGAT LELGGKNPMI VAPDADLAAA VAGAVRGSFS SSGQLCMSIE RIYVHRSIAE TFTRELAAAT RDLRVGADYS YAYQMGSLVS ADQLERVSAH VDDAVAAGAR VLAGGRPLPE LGPYFYAPTV LADVPPTARA YRSETFGPVV SVYPVDSLDD AVRAANDSEL GLNASVWSRD TRRARALAAR LRAGSVNVNE AYTAAWGSMD APSGGWGDSG LGRRHGTAGL HEVTWAQTVA HQRVWPIGEH GPLTGRRYQG VMTTALRALR VVGRR
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