Gene Bcav_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1780 
Symbol 
ID7861288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2040196 
End bp2041233 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content72% 
IMG OID643865868 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002881798 
Protein GI229820272 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.353159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGGTT CCACCACGCG AACCCGGCTC AAGGACCTGG CCGAACAAGC CGGGGTCAGC 
ACGGCCACCG TGTCGCGCGT CCTCAACCGC AAACCGGGCG TCGCGGAGGA GACGCGGCGC
GCCGTCTACG AGGCGCTCGA CCTCCTCGGC TACGAACGCA CCCGCCTGCC CGAGGCGACG
TCCGCCGGGC TCGTCGGCCT GGTCCTGCCG GAGCTCACCA ACCCGGTGTT CCCGGCGTTC
GCCCAGTCGA TCGAGACGGT GCTCGCGCAC CACGGCTACA CGCCGATGCT CTGTACGCAG
ACCTCGAGCG GCGCGACCGA GGACGAGTAC GTCGAGACGC TGCTCGCCGC GGACGCCGCC
GGCATCGTCT TCGTCTCCGG GCTGCACGCC GACACCCAGG CCCCGGTCGA TCGCTACGAA
CGGCTGCACA CCCGCGGCGT GCCGTTCGTC CTCGTCAACG GGAAGCCCGA GCGGCTCGAC
GCCTCGGCCG TGTCCGCCGA CGAGCGCCTC AGCATGCACC TGGCGGTGCG TCACCTCGTC
TCGCTCGGGC ACACCCGGAT CGCGCTCGCG ATCGGACCCT CACGGCTGCT GCCGGCGGTC
CTCAAGCGGG ACGGGTTCAT CAAGGCGCTC GCCGATCACG TCGGGACCGA CGACGGCGAG
GAGCACGTCC GCACCACGCT GTTCACCGTG GAGGGCGGCC AGGCAGCGGG GCGCGAGCTC
GTCCGGGAGG GGTACACGGC CATCGTCTGC GGCTCCGACC TCATGGCGCT CGGCGCGATC
CGGGCCGTGC GGTCTGCCGG GCTGCGTGTT CCCGAGGACG TCTCGGTGAT CGGCTACGAC
GACTCACCGC TGATGCCGTT CACCGACCCG CCGCTCACCA CGCTGCGGCA GCCGGTCGAG
GCGATGAGCC AGGCCGCTGT GAACACGCTC CTCGCGGAGA TCGCCGGATC CCCCGCCCGG
CCCGAGCTGC TCTTCGACCC GGAGCTCATC GTGCGCGGGT CCACCGGCCC GGTGCCCAAG
GCGGCCCCGC CGTCGTGA
 
Protein sequence
MAGSTTRTRL KDLAEQAGVS TATVSRVLNR KPGVAEETRR AVYEALDLLG YERTRLPEAT 
SAGLVGLVLP ELTNPVFPAF AQSIETVLAH HGYTPMLCTQ TSSGATEDEY VETLLAADAA
GIVFVSGLHA DTQAPVDRYE RLHTRGVPFV LVNGKPERLD ASAVSADERL SMHLAVRHLV
SLGHTRIALA IGPSRLLPAV LKRDGFIKAL ADHVGTDDGE EHVRTTLFTV EGGQAAGREL
VREGYTAIVC GSDLMALGAI RAVRSAGLRV PEDVSVIGYD DSPLMPFTDP PLTTLRQPVE
AMSQAAVNTL LAEIAGSPAR PELLFDPELI VRGSTGPVPK AAPPS