Gene Bcav_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1622 
Symbol 
ID7858818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1868276 
End bp1868581 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content65% 
IMG OID643865709 
Productribosomal protein L21 
Protein accessionYP_002881640 
Protein GI229820114 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.823278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.700415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTACG CGATCGTCAA GGCCGGTGGC CGGCAGGAGA AGGTCTCTGT CGGTGACATC 
GTCGTGGTCG ACAGGGTCGG CGGCGAGGTG GGCGACACGA TCGAGCTCAC GCCGATCCTG
CTCGTCGACG GCGACAAGGT CACGAACGGC AAGGACCTGG CCGACGTGCG GGTCTCCGCC
GAGATCGTGC GGCCCGAGAA GGGCCCGAAG ATCACGATCC TCAAGTTCAA GAACAAGACG
GGGTACCGCA AGCGTCAGGG TCACCGGCAG AAGCTGACCC GGCTCAAGGT CACCGACATC
GCCTGA
 
Protein sequence
MVYAIVKAGG RQEKVSVGDI VVVDRVGGEV GDTIELTPIL LVDGDKVTNG KDLADVRVSA 
EIVRPEKGPK ITILKFKNKT GYRKRQGHRQ KLTRLKVTDI A