Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1543 |
Symbol | |
ID | 7859699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1771597 |
End bp | 1773033 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643865628 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002881561 |
Protein GI | 229820035 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.793818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0319696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA TCGACCGCCG CGCCTTCATG GGCGGACTCG GACTCGCCGG CATGGCCGGC ATGCTCGCCG CCTGCGGGGG CGAGAGCGCA CCGCCGAACG CCAGCGGAGG CGGCGGGGGC GGCGCCGACG GGACGCTGCG GTGGTGGGAC CACCTCGGCG GCCTGCAGGA CCTGCACGAT CAGTGGGCCG CGGACGAGGG CGAGCGCCTC GGCGTCACGA TCGAGCACAC GTACAACGAG CCGGGCAAGG CCACGGAGGC GCTGCAGCTC GCCAACCAGA GCGACCAGCT GCCGGACGTG TACACGCCGC TCGTCGGGCT CCCGATGCCC GCGCTGGTGG ACGCCGGCTG GATCCACGAG ATCACGCTGA GCGACGAGGC GATCGCGCGG CTCCCCGAGG GCAGCTTCGT GGAGGGTCTC ACGATGCTGG ACGGCAAGAT CTACGGCCTA CCGGCGTTCA CGGACAAGCA GTACGCGGCG TGCACCTGGT ACAACTCCGC CATCGCCGAG GAGGTCGGCT TCGAGCCCCC CACGAGCTAC GACGAGTTCC TCGCGGTGCT CCAGGCGATC GCCGACCACG GCGCGTACGC CCCGATGACC ATGGCGCTCG GCGCCACGGG CCGGATGCGG GAGCAGATCG ACGATCTCGC GCAGGCCGGC GGCTTCCCGG GCTACCAGGG GCTGCGGTAC GACACCGGCG AGTACGAGTA CCACCACGAC GCCTACGTGG CCGCGATCGA GCTGTACAAG GAGATCTCGG ACCGGGGGTT CCTGCTCCCG GGCACGAACA ACTTCCAGAT CCCCGACGCG CGCGGTCGCT GGGCGGCCGG CGAGATCGCC TTCCACATGG ACGGGCCGTA CTCGCCGGGC GCGGTCCGCT CGCTGAACCC CGACGCCCTG GAGTTCATGG CGGTGGCCGG GATGCTGACG CCCGAGGGTG ACGAGGTCGT GGCGACGCGC GGGGCACGCG GTGCGGACTG GGTGGTCGGC GGCACGACGC AGGTGGCCGA GTACGCCAGC CAGCTGATCG AGACGTTCAC GCAGGAGGAC TACCAGACGG CGCTCGCGTC CGGCATGGAC CAGCCCCCGA TCGTGCTCGA CACGGTCGCG GGCGCGGACG TCATCGAGCC GTACGCCTGG CTCGTGGAGG AGTTCCGGAC CCGGATCTTC CGCGGTCCGC AGCCCATCGT CCGCAACGTC GACGTCGCGA CCGTGCAGGC GAACCAGTCG CCCGTCGCGC CGGAGCTCGG GAACGTCATC CAGGGCTACC TGGGCGGCGA GATCTCGGAC CTGCGCGCCG CCCTGGTCGA CCTCTCCGAC GCGAACTCCG CGGCTCTCGA CGACGCGATC GCGACGGCGG TCGACGACGG AGCCGAGGTC TCCCGGGCCG ACTGGGAGTT CCCGGACTGG GTCCGGGGCC AGGACTACAC CTACTGA
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Protein sequence | MSTIDRRAFM GGLGLAGMAG MLAACGGESA PPNASGGGGG GADGTLRWWD HLGGLQDLHD QWAADEGERL GVTIEHTYNE PGKATEALQL ANQSDQLPDV YTPLVGLPMP ALVDAGWIHE ITLSDEAIAR LPEGSFVEGL TMLDGKIYGL PAFTDKQYAA CTWYNSAIAE EVGFEPPTSY DEFLAVLQAI ADHGAYAPMT MALGATGRMR EQIDDLAQAG GFPGYQGLRY DTGEYEYHHD AYVAAIELYK EISDRGFLLP GTNNFQIPDA RGRWAAGEIA FHMDGPYSPG AVRSLNPDAL EFMAVAGMLT PEGDEVVATR GARGADWVVG GTTQVAEYAS QLIETFTQED YQTALASGMD QPPIVLDTVA GADVIEPYAW LVEEFRTRIF RGPQPIVRNV DVATVQANQS PVAPELGNVI QGYLGGEISD LRAALVDLSD ANSAALDDAI ATAVDDGAEV SRADWEFPDW VRGQDYTY
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