Gene Bcav_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1318 
Symbol 
ID7858781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1493774 
End bp1496632 
Gene Length2859 bp 
Protein Length952 aa 
Translation table11 
GC content75% 
IMG OID643865402 
ProductBeta-glucosidase 
Protein accessionYP_002881339 
Protein GI229819813 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG ACGCCCGACC CGCCTTTCGC GACCCGTCTC TGAGCGCTGA CGTCCGCGCC 
CGCGACCTTG CGGCGCGGCT CACGCAGGCC GAGAAGATCG CCATGCTGCA TCAGTACGCC
CCCGCTGTGC CTCGGCTCGG GCTCGCGGCG TTCCGCACCG GGACCGAGGC GCTCCACGGC
CTGGCCTGGC TCGGCACGGC CACCACGTTC CCCCAGGCAG TCGGCCTGGC CGCGACCTGG
GACGCCGACC TCGTCCGACG GGTCGGCGCG GCGGTCGGCA CCGAGGTACG GGCCCGGCAC
GCGATCGATC CCACCGTCTC CCTCCAGGTG TGGGCGCCGG TCGTGAACCC GCTGCGGCAT
CCGCGCTGGG GCCGGAACGA GGAGGGTTAC TCGGAGGACC CGCACGTGAC GGCGTGGCTG
GCGACCGCGT ACGCCCGCGG GTTGCGCGGC GACCACCCCA CGTACTGGCG CACCGTCCCG
ACGCTCAAGC ACCTCGTGGG CTACGGGGCG GAGACCCATC GCGCCCTCAC GAACGCCCAG
CTTCGGCCCC GGGTGCTCCG CGAGTACGAG CTGCCCGCGT TCCGAGGACC GATCGAGGCC
GGCGTGGTGG GCGCGGTCAT GCCCTCGTAC AACCTCGTCA ACGGCCGGCC GGCTCACCTC
GCGGCGGACA TCATCGCGGA GCTCCGGTCG TGCGGTCCGC ACGAGGTCGT CGTGGTGTCC
GACGCCGGAG CACCGAGCAA CCTGTCCGGC ATCCAGCGCT GGTGCACGGA CCCGGTCGAG
GCGCGTGCCG CGGCCCTGCG CGCCGGTATC GACTCGTTCA CCGACGACGA CGCCGACGCC
GCCCCGACCC TCGCCCATCT CACCGCGGCC CTCGATCGCG GACTGATCAC TCAGGAGGTC
GTGGACGCGG CGGTCCGGCG GCAGCTCGCC TGGCGGATCC GCACGGGCGA GCTGGACCCC
GGCCTCGACC CCTGGGCGGG GACCGGCCCG GAGGCTCTCG ACGCCCCCGC CCACCGCACG
CTCGCCCGCG AGGCCGCCAC GGCCGCCGTC GTCGTCCTCG CGAACGACGG CCTGCTGCCG
CTCGAGCGCG CGGCGACCGT CGCCGTCGTC GGACCCCACG CCGACACCGT GCTGCGCGAC
TGGTACTCCG GCGCGGCGCC GTACACGATC GGCATCGCGA CGGCCCTCGC CGAGAGCCAC
GGTGTGACGA CGTGCGACGG CGCCGACCGC GTGGCGCTGC GGTGCGTCAC CACGGGCGGC
TACGTGCGAA CCGCCGAGAG CGGGGTGCTG GTGGCCGACG CCGCCGACGC CGCCGCACCC
GAGGCCGCGT TCGACGTCAC GGACTGGGGC GACGGTGTCC TCACGTTCCG CTCGGTCGCG
ACCGGCCTGC TGGCCGGGGG CGGCTGGCCG CTGCGAGCCC AGGCCGAGCA CGTCGACGGC
TGGGTCGTGC AGGAGACGTG GCAGGTGCAC GTGCACGACG ACGGCAGCTG GTCGCTGCTG
CATCTCGGGT CCGGCCGATG GGTCGCAGCC GCCGACGACG GCACGCTCGT CGCCGAGGCA
CCGTCGCCTG AGCTGGCGAC GAGGTTCGTC CGGCGGATGC TGCGCGCCGG CCACGAGGCG
GTGGCGCGAG CAGCCGCCGC GGCCGACGTC GTCGTCGTCA CCCTCGGCAA CGACCCGCAC
CTGCTCGGAC GGGAGACCGA GGATCGTCCG CACCTGCGGC TGCCCAGCCC GCAGACCGAG
CTCTGGCGGG CAGCCAGCGA GGCGAACCCC CGAGCCCTCG CGGTCATCGT CTCCTCCTAC
CCGTACGTCC TGGCCGACGA TCTCCGCACG GCCCGCGCCG TCGTGTGGAG CTCGCACGCG
GGTCAGGAGC TCGGGCACGG CGTGGCGGAC GTGCTCACGG GCGCGGCCGA GCCGTCGGGG
CGCCTCGCGC AGGCCTGGCC CGAGGCGGAG GAGGACGCCG GCGACCTCGT CGACCACGAC
ATCATCGCGG GTGGCCTGAC GTCGTGGTAC GCGAGTGCGG CGCCCCGCTT CGCCCTCGGG
CACGGCCTCA CGTACTCGTC CGTGACGTAC GACGCCCTCG ACGCACCGGC CGCCCTCGAG
GGTGCGCAGC ACGACGACGT CGTCGCCGTC AGTGTCCGGG TGTCGAACAC CGGTGAACGG
CCCGCGCACG AGCTCGTCCA GGTCTACGCG TCGGCCCTCG AGCACCGCCT GCCGGTACCC
CGGCGACGCA TCGTGGCCCA CCGTCGCGTC ACGCTCGCCC CGGGGACCTC GCGCGACGTC
GAGCTGCGGT TCCGCCTCGC CGACCTCGCG GTGTGGGACG TCGGGCACGA GCGCTGGGTC
GTCGAACCGG GGCGCTACCT CCTCGCCGCC GGGACCGGCG AGCAGGATCT CCCGCTCCGC
CACGAGCTCA GGGTGACGGG CGCCCCGGTG GCACCGCGCG CCGCCACCAG CCTCGGGGCC
GCCGCATTCG ACGACGCGGC GCACGTCGTC CTCACCGAGC GGACGCCCCT AGCCGGCGCC
GCCGTCGAGG TCGCACCCGG CCGCGGCGAG GGATGGGTCG CGTGGTGGGC CGTCGACCTG
GACGGCGTCG GGCCGCTCAC GATCGAGGTG GCGCGCGACG GGGTAGGTCC GGCCGGCGTG
CGCATCGAGA CCCGTGAGCC CGGTTCCCCG TGGGCGCGCT ACGCACAGGC CCAGGTGCCG
CTCGAGGGCG GGAGGCACGA CGTCGTCGCG CTCGTCCCGT CGGCCGCCGA GGCACCGAAG
GGCGTGCGTG ACGTGCGAAC CGTGCTCACC GGGTCCGCCC GGCTGATCGC GCTGCGTCCC
GCCGCGCCCG AGGAGATCCC GCGTGACGAC GATCGGTGA
 
Protein sequence
MADDARPAFR DPSLSADVRA RDLAARLTQA EKIAMLHQYA PAVPRLGLAA FRTGTEALHG 
LAWLGTATTF PQAVGLAATW DADLVRRVGA AVGTEVRARH AIDPTVSLQV WAPVVNPLRH
PRWGRNEEGY SEDPHVTAWL ATAYARGLRG DHPTYWRTVP TLKHLVGYGA ETHRALTNAQ
LRPRVLREYE LPAFRGPIEA GVVGAVMPSY NLVNGRPAHL AADIIAELRS CGPHEVVVVS
DAGAPSNLSG IQRWCTDPVE ARAAALRAGI DSFTDDDADA APTLAHLTAA LDRGLITQEV
VDAAVRRQLA WRIRTGELDP GLDPWAGTGP EALDAPAHRT LAREAATAAV VVLANDGLLP
LERAATVAVV GPHADTVLRD WYSGAAPYTI GIATALAESH GVTTCDGADR VALRCVTTGG
YVRTAESGVL VADAADAAAP EAAFDVTDWG DGVLTFRSVA TGLLAGGGWP LRAQAEHVDG
WVVQETWQVH VHDDGSWSLL HLGSGRWVAA ADDGTLVAEA PSPELATRFV RRMLRAGHEA
VARAAAAADV VVVTLGNDPH LLGRETEDRP HLRLPSPQTE LWRAASEANP RALAVIVSSY
PYVLADDLRT ARAVVWSSHA GQELGHGVAD VLTGAAEPSG RLAQAWPEAE EDAGDLVDHD
IIAGGLTSWY ASAAPRFALG HGLTYSSVTY DALDAPAALE GAQHDDVVAV SVRVSNTGER
PAHELVQVYA SALEHRLPVP RRRIVAHRRV TLAPGTSRDV ELRFRLADLA VWDVGHERWV
VEPGRYLLAA GTGEQDLPLR HELRVTGAPV APRAATSLGA AAFDDAAHVV LTERTPLAGA
AVEVAPGRGE GWVAWWAVDL DGVGPLTIEV ARDGVGPAGV RIETREPGSP WARYAQAQVP
LEGGRHDVVA LVPSAAEAPK GVRDVRTVLT GSARLIALRP AAPEEIPRDD DR