Gene Bcav_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1257 
Symbol 
ID7859568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1429119 
End bp1429778 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content76% 
IMG OID643865341 
ProductSAF domain protein 
Protein accessionYP_002881279 
Protein GI229819753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.209617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.160652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA CGGAGACCCG GCCCACCTGG CACGAGGGCA CCACGACCCG CGTGCGTCGG 
CCGAGCTGGC GCGACCCGAG GCTCGGCGTC GGGCTGCTGC TCGTCGCCGC CTCGGTGGCG
CTCGGGACCT GGGCGGTGCA GGCGGCCGAC GAGTCGGTCG CCGTGTATGC GGCGACGGAC
GACCTCGCGC CCGGTGACCG GCTCGACGCG GACGACCTGA CGGTCCGGCA GATCCGCTGG
GACGGCGAGG GTGGCACGTA CCTCCTGGCC GAGGACGGCG TGCCCGACGA CGTGGTCGTG
ACCCGACCGG TCGGCGCCGG CGAGCTCGTC CCCTCCTCCG CCACCGGCCC GGCCGACGCG
GTCGACACCC GCCCGGTCGC GATGCCGGTG CCGGCCGGTT CGGGGATCGG CGCCGGTGTG
CACGTGGACG TGTGGGCGGT CCCGCCGAGC TCGACAGGCG ACGACGGCGA CGAGGCGGCC
GTCCCCGAGC TCGTCGTCGA GAACGTCCTC GTCGCCAGCG TGACCGAGGA CGACACGCTG
TTCGCGTCCT CGAGCGGCCA GGTCGCCCGG GTGCTCGTGC CCGCCGACCA GGTCGGCGAC
GTCCTCGCCG TCACGGCGGC CGGCGGATCC ACGCTCATCG TCGAACGGCC GGGCGGATGA
 
Protein sequence
MTTTETRPTW HEGTTTRVRR PSWRDPRLGV GLLLVAASVA LGTWAVQAAD ESVAVYAATD 
DLAPGDRLDA DDLTVRQIRW DGEGGTYLLA EDGVPDDVVV TRPVGAGELV PSSATGPADA
VDTRPVAMPV PAGSGIGAGV HVDVWAVPPS STGDDGDEAA VPELVVENVL VASVTEDDTL
FASSSGQVAR VLVPADQVGD VLAVTAAGGS TLIVERPGG