| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0445 |
|---|
| Symbol | |
|---|
| ID | 7860705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 496103 |
|---|
| End bp | 496474 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643864523 |
|---|
| Product | Cupin 2 conserved barrel domain protein |
|---|
| Protein accession | YP_002880470 |
|---|
| Protein GI | 229818944 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.205887 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCG TGGCCAAGGA GGCGGACCTG CGGATCGGGA CCGGTCGGAC CGTGCGCTTC
GAGGGGGAGG GCTACGGCTC CGGGATCTCG TACTTCCACG TGGAGAACGA GCCGGGCCAG
GGGCCGGACG CGCACGTCCA CCCGTACTCC GAGACGTGGG TGGTCCTCGC CGGCACCGCT
CACATGCGCA CCGCCGACGG CGAGACGCTC GCGCACGCGG GCGACGTCGT CGTCGTCGGC
CCTGACACGG CGCACGCCTT CCGGGCCGCC GGCACCGAGA CGCTCCGGAT GATGTGCATC
CACGCGTCGC CGCGGATCCA GCAGGAGTTC CTCGCCGACG ACGAGAGCGA GCGGCTCGCT
GTCGCCTTCT GA
|
|---|
| Protein sequence | MLIVAKEADL RIGTGRTVRF EGEGYGSGIS YFHVENEPGQ GPDAHVHPYS ETWVVLAGTA
HMRTADGETL AHAGDVVVVG PDTAHAFRAA GTETLRMMCI HASPRIQQEF LADDESERLA
VAF
|
|---|
| |