Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0120 |
Symbol | |
ID | 7859285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 126099 |
End bp | 126764 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643864197 |
Product | hypothetical protein |
Protein accession | YP_002880147 |
Protein GI | 229818621 |
COG category | [S] Function unknown |
COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCAGTCAT CCACGAAGCA GGCACTCATC GTCCGCGGCG GCTGGGACGG GCACAGCCCC GTCGCCACCA CCGACCTCGC CGCCGCCGCC CTGACCGACC ACGGGTACGC CGTCGTCGTC TCCGACACGC TCGACGCCTA TCTCGACGCC GACGCGCTCG CGGCCACGGA CCTGATCGTC CAGTGCTGGA CGATGGGCGA GATCACCGGC GACCAGGTCG CCGGCCTGCG CGCCGCCGTC GCCGCCGGTA CCGGGCTCGC GGGCTGGCAC GGCGGGATCG CCGACGCCTT CCGCGCGACG CCGGAGTACC TCCAGCTGGT CGGCGGGCAG TTCGTCGCGC ACCCGGGCGG CATCGTCGAC CACAGCATCG AGGTCGCGCC GGAGCGGGCG GACCACCCGA TCGTGGCCGG CTTCACGTCC GTCGCGCTGA CGACGGAGCA GTACTGGGTG CTGAGCGACG CCCGCAACGA CGTGCTCGCG ACGACGACGC TCGCGCCGTC GCCCGGCGGG GAGTGGACGG AGCCGTTCGT CTCGCCGGCC GTGTGGACGC GCACGTGGGG TGCCGGCCGG GTGTTCGTGT GCACGGCCGG CCACCAGCTC GGCGACCTCG AGACCCCCGA GATCGCCGGG ATCGTGGAGC GCGGCATGCT GTGGGCGTCC CGGTGA
|
Protein sequence | MQSSTKQALI VRGGWDGHSP VATTDLAAAA LTDHGYAVVV SDTLDAYLDA DALAATDLIV QCWTMGEITG DQVAGLRAAV AAGTGLAGWH GGIADAFRAT PEYLQLVGGQ FVAHPGGIVD HSIEVAPERA DHPIVAGFTS VALTTEQYWV LSDARNDVLA TTTLAPSPGG EWTEPFVSPA VWTRTWGAGR VFVCTAGHQL GDLETPEIAG IVERGMLWAS R
|
| |