Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6170 |
Symbol | |
ID | 4315074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 737800 |
End bp | 738870 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638154014 |
Product | AraC family transcriptional regulator |
Protein accession | YP_778048 |
Protein GI | 115360911 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCACA CAGTGTCGAA TCATTCATCG ACGGGGTTAA GCGTGAATCG TGGTAGAGGC GCCGGCAACG GGCATCAACG AGCAAGCGTA ATCGTACTGT TGCTCGAAGG TTTCTCGATC ATGCAGATGG GCAAGCTGGC CGCCGTTTTC GAACTCGCGA ATCAACTTGG ACGCGCCGAA GGCGCTTTCA CCGACCGTTA CGAGTTGCGC TTGTATTCCG TGCATGGCGG GCCGGTTCGT TCGTCGTCGG GCGTGGGCAT CTGGACGGAA GCGGCGCGCA CGCTGGGAGC CAGCACGGTC CATGCGATGT TCGTGTTGAG CGGTCAAGAC GGGATCGACG CGCTCGACGA GCAGTTGATC GCGTGGCTCA GGCATGCGCA CCAACGCGCG CGCGTCGTTC GTGGCAGCCA CGGCGGCCGC AAGTTGCTCA CGCAGATTCA TCTGTCGCAG AAAGAGGTCG AGAAGGCCGG GCCGGCCGCG GACGGCAGCG GCGCGTCGTC TGCCGGACGC GATGACGATG AACCGGCCGG TGACGAAGAC GACGGGCCGT TCTCCGATGC GTTGTCGATC GTCCGCGTGG ACATGGGCTA CGAGATCGCG CAGGAAATCG TGATGTGCAT GGTGTCCGGC GCGAACCGCA AGCTGACCGA CGTGCTGTTC GGCGCACGGG TCGCGCGCGC GAGCACGTTG ATCCGGATGG CAGCGCATCA CCTGCGCGTG AACAGCGAGA ACCGGATCTC CATCGCCGAT GCCGCGCAGG CCGCCGCGAT GAGCGAGCGC AATTTCCTGC GGCGCTTCAA GAACGAAATC GGCGTCACGC CCACCGAGTT CGTGCTGAGG ATCCGCCTCG AAAAGGCGTG CCGCATGCTG ATCGAAACCG ATCTTCCGGC GGACAAGGTC GCGCGACGCA CGGGCCTCGG CAGCGGCGAC CGGATGGCGA AGCTGTTTCG CCAGCACTTG CAGACTTCGC CAACCGAATA TCGGGCGGCC GCCCGAAAAG GCGGCGACGC GTCGACCGAC ATGCTGTACG CATCGGACCT CGGCGACTGG ATGAACGGCG CACCATCCTA G
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Protein sequence | MMHTVSNHSS TGLSVNRGRG AGNGHQRASV IVLLLEGFSI MQMGKLAAVF ELANQLGRAE GAFTDRYELR LYSVHGGPVR SSSGVGIWTE AARTLGASTV HAMFVLSGQD GIDALDEQLI AWLRHAHQRA RVVRGSHGGR KLLTQIHLSQ KEVEKAGPAA DGSGASSAGR DDDEPAGDED DGPFSDALSI VRVDMGYEIA QEIVMCMVSG ANRKLTDVLF GARVARASTL IRMAAHHLRV NSENRISIAD AAQAAAMSER NFLRRFKNEI GVTPTEFVLR IRLEKACRML IETDLPADKV ARRTGLGSGD RMAKLFRQHL QTSPTEYRAA ARKGGDASTD MLYASDLGDW MNGAPS
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