| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5873 |
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| Symbol | |
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| ID | 4314779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 349767 |
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| End bp | 351464 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153714 |
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| Product | type IV prepilin |
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| Protein accession | YP_777753 |
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| Protein GI | 115360616 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGC GCACCCGTAC CCTTGCCCGC AACGGCATGC GGCGCCCCGG CCCCCGCGTG
CGGCCGGCTC GCCGCATGTC CGGCTTCACG ATGGTGGAGA TGCTGGCCGT GCTTGCGCTC
GCCGCATTGA TGATGGCGGG CGTCGTCACG CTCACGAACT CGTCGCTCGA CGATACGCGC
GCGCAGCAGG CCGCGCTTTA TCAGTCGCAG CTGACGGCGG CTGCCACGCG GCTCATTCAA
CAGAACTACA CGGCGCTCGC GGCCCAGGCC ACGACTACCT CGCCGGTGAT CGCGAAAATG
ACCGGCTCGA CGTATCAGCT GTCGACTTAC CTGTCGAATG CGTTGAGCGG CACGAACCCC
TATGGTCAGG TGCCGTGCCT GCTCGTCTAC GCGGCCCCGG GCGGCGCCAA CCCGGTGGCG
TTGCAGGCGC TGCTCGTCAC GGAGGGCGGC CGGACCATTG CCGATCCCGA ACTCGGCTAC
ATCGCGGCGA ACGCCGGCCC GGGCGGCGGT TCGATCCAGG CGGCGAACAA TGCGATCGGC
GCGGCCATCG GCGCCTTCGG CACCTGGAAG ATCGATACGC CCAACCCGGC GAATACATCC
TGCACAAGCA CGAAAACGGG CACGGGACAT CTGGCGAGCC TGATTTTCTA CGACGGCACG
CAGGCGCAGA ACGTCGACTA TCTGTACCGC GTGGCCGTGC CGGGCAATCC GCAGGCGAAC
ACGATGCAAG TGCCGATCGT GCTCGCGCGG CAGATCGACT ATGCCGCCTG CACGCAGCCC
GGCGCCATCG CGGCCGACTC TTCGGGCAAC GTCCTGAATT GCGATGGAAC GCAGAACCTC
TGGGTGCCGC AGGCGGCCTA TCACTGGCGC GAACCGGTGG CCGACGAAGC GGCGCTCGGG
GGCGTTGCCG CGCATCAGGG CGACGTGCGG CTCACCACCG CGACGAATCG GGCCTATGCG
TACAACGGCG CCACATGGCA GGCGCTGGCG GTGGACGAAG CGGGCAATCT CGCGCTCGGC
AACGCGCACA ACGTCGGCGA CCCATGCCCG CCCGCGCCGC AGAATTCGGC CATCGCCCCC
GCGTCGGCGA GCACGACGCT CGTCTCCACC GATGCGAACG GGCGCGTGCT GTCGTGCCGC
GGCGGCAAGT GGCAAACGCA AAGCGAAATC GAGCCGGCGT CCTCGCTCAC AGGCTGTCAG
CTCGTGATGG CCAACCCGAA CGGCGCGGGC GATTACTCGG CCTGCACGGG CCAGCCGGCG
ACGAACTTCC AATCGGGCGC CTATTCGTAC AACGGCAGCA ACGGTACGTA CTCGTATACG
TTCAGGACGA CCGTCAACCT CACCAAGCCG GGGATCATCG TCGCGTCCAC CTGGGCGCAC
CTGAACGACG GCATGTGCAA CGGCCCCACC GGCAACCGGG CGCAACTCTC GCAGAGCATC
GACATCACCG ACAGCGGCAA CCACAACCTC GGGCATACGG AGAGCCAGAC GCCGACGCTT
CAGGACGATT CGGGCGGGAT CAACAACGCG CTGTCCCAGG CGGGCACGCC TGGCACCTAT
ACGATCGTCG TGACGACGAA CTGGGCGACG TACGCCGGTA TCACGACGCC GTGGGTCAGC
AGCTTTTGCG GGGAGTCCGG CCAGACGGTC TGGAACACGC CCGTCGCGGC GGGCTGGACG
ATCAACTCCT ACTACTGA
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| Protein sequence | MTERTRTLAR NGMRRPGPRV RPARRMSGFT MVEMLAVLAL AALMMAGVVT LTNSSLDDTR
AQQAALYQSQ LTAAATRLIQ QNYTALAAQA TTTSPVIAKM TGSTYQLSTY LSNALSGTNP
YGQVPCLLVY AAPGGANPVA LQALLVTEGG RTIADPELGY IAANAGPGGG SIQAANNAIG
AAIGAFGTWK IDTPNPANTS CTSTKTGTGH LASLIFYDGT QAQNVDYLYR VAVPGNPQAN
TMQVPIVLAR QIDYAACTQP GAIAADSSGN VLNCDGTQNL WVPQAAYHWR EPVADEAALG
GVAAHQGDVR LTTATNRAYA YNGATWQALA VDEAGNLALG NAHNVGDPCP PAPQNSAIAP
ASASTTLVST DANGRVLSCR GGKWQTQSEI EPASSLTGCQ LVMANPNGAG DYSACTGQPA
TNFQSGAYSY NGSNGTYSYT FRTTVNLTKP GIIVASTWAH LNDGMCNGPT GNRAQLSQSI
DITDSGNHNL GHTESQTPTL QDDSGGINNA LSQAGTPGTY TIVVTTNWAT YAGITTPWVS
SFCGESGQTV WNTPVAAGWT INSYY
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