| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5830 |
|---|
| Symbol | |
|---|
| ID | 4314736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 302822 |
|---|
| End bp | 304297 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638153671 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_777710 |
|---|
| Protein GI | 115360573 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.41171 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACATC GGTCGACGCA ACGTGCGTGG CGGGGCGTCC TGCCGACCGC CATGCTGGCG
GCGGGCGCCG CGACGTACGC CGGTACGGCG GCCGGCGCCG ACGCATCATC TGACCCAGCC
CCCGCCACGG CCGCGGCTCC AGCCGCCGGC ACGTCGTGCA CCGCGAAGCG GCCCACGGTG
CTGTTCAATC GCTGGCAGGA AGACTGGTCG GTGCTCGCGA ACCCGTGCGT GCCGCGCAAG
CCGCTCGACG CGTTGAAGTA CATCCCGCTG GGCGGCGATC CGTCGACCTA CCTGTCGCTC
GGCGCGAACC TGCGCGAGCG CTTCGAGCTG AACAATGCGC CGCTGTTCGG GCTGGGCGCC
GCGCATGACG ACAATTACGT GATCCAGCGT GCGAACGTGC ACGCGGATCT GCGCTATGCC
GGGCATTTCC AGGCGTTCTT CCAGCTCGTC GATTCCCGGC CGTTCGGCAA GGATACGGTC
GGGGTGGTCG ATCGCGATCA GTTCGACATC GAACAGGCGT TCGTCGCGTA TGTCGATCAG
TTGGGCGGCG GCACCTTCAA GACCCGCATC GGCCGGCAGG AGATGGCATT CGACTTGCAG
CGCTTCGTGT CGGTGCGCGA CGGGCCGAAC GTGCGTCAGG CGTTCGACGC GCTGTGGGCC
AATTACGAAA TCGGCAAATG GCGGCTGATC GGCTACGTGA CGCGCCCGGT GCAATACCGC
AACGACGCGG TGTTCGACGA CGTGTCGAAC CGGCACCTGA GATTCGACGG CGTGCGTGTC
GAGCGCAGCG GCACAGGTCC TGGCGACCTG TCGGCGTACT GGTCGCGCTA TACGCGCGAC
AATGCGCGCT ATCTCGCCGG CGCCGGCACC GAGCGACGCG ACGTGTTCGA CATGCGCTAC
GCGGGCAAAT CGGGGCAATT CGACTGGGAC GCCGAGGCGA TGCTCCAGAC CGGGCACATC
GGACCGGACA CGATCGGCGC GTGGGCATTC GGCACGCTGG CCGGCTATAC GTTCGCCAAA
ACGGCCGGCA CGCCGCGCAT CGGCATTCAG TTCGACGGCG CATCGGGCGA CAGGCATCCC
GGCGACGGGC GCATGGGCAC CTTCAACCCG CTGTTCCCGA ACGGCTATTA CTTCACGCTC
GCCGGCTACA CCGGCTACAG CAACCTGATT CACGTGAAGC CGTCGCTGAC GTTCAAGCCG
GCCAGCAACG TGACGGTCAT GACCGCGGTC GGCTTCCAGT GGCGCGCGAC GACGGCCGAC
GCGATCTACG GGCAAGGGAT GTCGGCGGTG CCCGGCACGG CCGGCAAGGG CAGTGCGTGG
ACCGGCATGT ATGCGCAGGC CCGCGTGGAC TGGCTCGTCA ATGCAAACGT CGCGCTTGCC
GTCGAAGCCG TGCACTTCCA GGTCGCCGAT TCGATTCGCG CGCTCGGGGC GCGCAATGCC
GACTATGTCG GCATGGAGGC GAAGTTCGGC TGGTAA
|
|---|
| Protein sequence | MGHRSTQRAW RGVLPTAMLA AGAATYAGTA AGADASSDPA PATAAAPAAG TSCTAKRPTV
LFNRWQEDWS VLANPCVPRK PLDALKYIPL GGDPSTYLSL GANLRERFEL NNAPLFGLGA
AHDDNYVIQR ANVHADLRYA GHFQAFFQLV DSRPFGKDTV GVVDRDQFDI EQAFVAYVDQ
LGGGTFKTRI GRQEMAFDLQ RFVSVRDGPN VRQAFDALWA NYEIGKWRLI GYVTRPVQYR
NDAVFDDVSN RHLRFDGVRV ERSGTGPGDL SAYWSRYTRD NARYLAGAGT ERRDVFDMRY
AGKSGQFDWD AEAMLQTGHI GPDTIGAWAF GTLAGYTFAK TAGTPRIGIQ FDGASGDRHP
GDGRMGTFNP LFPNGYYFTL AGYTGYSNLI HVKPSLTFKP ASNVTVMTAV GFQWRATTAD
AIYGQGMSAV PGTAGKGSAW TGMYAQARVD WLVNANVALA VEAVHFQVAD SIRALGARNA
DYVGMEAKFG W
|
|---|
| |