| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5677 |
|---|
| Symbol | |
|---|
| ID | 4314567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 117971 |
|---|
| End bp | 118216 |
|---|
| Gene Length | 246 bp |
|---|
| Protein Length | 81 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638153519 |
|---|
| Product | AbrB family transcriptional regulator |
|---|
| Protein accession | YP_777558 |
|---|
| Protein GI | 115360421 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.482694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAG CAACTATCAC TTCCAAGGGC CAGGTCACGA TCCCTGTGGA CGTCCGCAAT
CAGCTTGGCC TTGCGTCGGG AGACCGGATT GAATTCAGTT TCAACGAGAC GACCGGCCGG
TATGAGATCT ACCCGGCCAC GCGTTCGCTC GCGTCGCTCA AGGGCATCGT GAAGAAGCCC
GCCAAACCGG TGTCGATCGA AGACATGAAT CGGGCCATCG CCGAGCAGGG AGCATCCGCG
CGATGA
|
|---|
| Protein sequence | MTAATITSKG QVTIPVDVRN QLGLASGDRI EFSFNETTGR YEIYPATRSL ASLKGIVKKP
AKPVSIEDMN RAIAEQGASA R
|
|---|
| |