Gene Bamb_5470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5470 
Symbol 
ID4314359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2532349 
End bp2533035 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID638153312 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_777351 
Protein GI115360213 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC GAACTGACGG CGCGCGCGCG GCTTCGGCCG CGGCCGCCCG CGACGACGAT 
GAAGCGGAAG GCACGCAGTC CGGACGCTGG CTGATTTCCT ACGCGGATCT CATCACGACG
CTGATGGTGT TGTTTCTCGC GCTGTACGTG CTGCAGCTCG CGAAATACAA CGCGCTCGAT
GCGCGCTATC AGACGCTCGC GCGGCACGAC GGCGGTGCGT CAAGCGTGAT GGCGGCCGCA
CCTGCGACAC CCGAGCGCGC GCCCGCATGG CTGACGTCGC TCGATGCGCT GAAGACGAAC
GGCCGCATCT CGCTCGTACG CGCGCCGCAC GGTATCGAGA TCGGCATCGA TGCGAAGATC
CTGTTCAACG TCGGCGATGC GCGCCTGCTG CCCGACGCGA CGCCGGTGCT GAGTGAGATC
GCGCGCGCGT TGAGCGAGCA TGCGACCGGC GACATCCTCG TCGAGGGGCA TACCGACAGC
GCGCCGATCG CGAACGCGAA ATACGAATCG AACTGGGAGC TGTCATCCGC GCGGGCGGGC
AGCGTCGTGC GCTATCTGGC CGAGCGCGGC GTCGCGCCCC ACCGGCTCGC GGCGATCGGG
CGAGCCGACA CGCAGCCGCT CGTCGCCGGC GACGATGCGC CCGCGCGGGC GCGCAATCGC
CGCGTGACGA TCTTCGTCGC ATATTGA
 
Protein sequence
MTARTDGARA ASAAAARDDD EAEGTQSGRW LISYADLITT LMVLFLALYV LQLAKYNALD 
ARYQTLARHD GGASSVMAAA PATPERAPAW LTSLDALKTN GRISLVRAPH GIEIGIDAKI
LFNVGDARLL PDATPVLSEI ARALSEHATG DILVEGHTDS APIANAKYES NWELSSARAG
SVVRYLAERG VAPHRLAAIG RADTQPLVAG DDAPARARNR RVTIFVAY