Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5304 |
Symbol | |
ID | 4314193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2343781 |
End bp | 2344752 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153145 |
Product | LysR family transcriptional regulator |
Protein accession | YP_777185 |
Protein GI | 115360047 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.968375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTTGTT TAATGCTTCG CAATGCCAGC ATTAAGAGAC ATGCAATGCT CGATCTCGAA GACCTTCGAC TCGTCCGCGC GATCGGCGCG TCGCGCTCAT TGGCATCCGC CGCTCGATTG CTCGACCTCA CCCCGCCCGC AGTCACGATC CGCCTGCAGC GGATGGAGGC GCGGCTGGAC GTACGCCTGG CCGTGCGACA GCCGAAAGGC ATCGCATTGA CCGACGAAGG CCAGCGGCTG TATCAGGAAG CCGTCGAGAT TCTCGAGCGC GTCGAGGCGC TGCCGGTCAA CATCTCGGGC GATCACGGCG ACGTGCAGGG CACGCTGCGC GTCGTCGCGC CGTTCGGCTT CGGACGCAAG TACGTCGCGC GGATCGTGCG CGACGTGCAG CGCGCGCATC CGAAGCTCGA GATCTCGCTG CATCTGTCGG AGAGCCCGCT GGGCAGTGCG TCGGGCGCCG ACGTGGTCGT GCATGTCGGC ACCCTGAAGT CGTCGTCGTG GATCGGCTAT CCGCTCGCAC CCAACGAGCG CTTCCTGTGC GCGAGCCCCG GTTACGCGCG TCGCATCGGC GAACTGAACC ATCCGTCCGA CCTCGCGCGC TACGACTGCC TGTGCCTGCG CGAGAACGAC GAGGACGTCC CGCGCTGGCA CTTCTCGCAA CCCGGCGACA ACAAGGGTGA AGCCAGGCGA TCCGCGGTAA TCCGCGTCTC GGGCGCGCTT TCATCGAACG ACGGCACCGT CATCACCGAC TGGGCACTGG CCGGGCTCGG CATCGTCGAG CGCTCGGAAT GGGACGTCGC GCCGCTGCTG GCGAACGGCA AGCTGGTGCG GCTACTCCCC GACTGGCATC TGCCGCCCGC ACCAGTAACC GCGCTGCTGC CGTCGCGCAC CGGCCGCTCC GCGCGGCAAC GGGTTTTTCT CGACGCCGCG AAGCAATTTC TCGATCCGCC GCCATGGCGC GGCAAGGCCT GA
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Protein sequence | MCCLMLRNAS IKRHAMLDLE DLRLVRAIGA SRSLASAARL LDLTPPAVTI RLQRMEARLD VRLAVRQPKG IALTDEGQRL YQEAVEILER VEALPVNISG DHGDVQGTLR VVAPFGFGRK YVARIVRDVQ RAHPKLEISL HLSESPLGSA SGADVVVHVG TLKSSSWIGY PLAPNERFLC ASPGYARRIG ELNHPSDLAR YDCLCLREND EDVPRWHFSQ PGDNKGEARR SAVIRVSGAL SSNDGTVITD WALAGLGIVE RSEWDVAPLL ANGKLVRLLP DWHLPPAPVT ALLPSRTGRS ARQRVFLDAA KQFLDPPPWR GKA
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