| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5219 |
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| Symbol | |
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| ID | 4314109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2256047 |
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| End bp | 2257135 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638153061 |
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| Product | porin |
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| Protein accession | YP_777101 |
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| Protein GI | 115359963 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.10924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA GGTTTGGAGC AGCCGCGATG CTTGTCATCG CGCAGAGCGC GCACGCGCAA
AGCAGCGTGA CCTTGTTCGG TCTGATCGAC AGCGGCATCT CGTATGTCAG CAACGAGGGC
GGCGGGAAGA ACGTCAAGTT CGACGACGGC ATCTTCACGC CGAACCTGTT CGGCTTGCGC
GGCACCGAGG ATCTCGGCGG CGGATATCGC GCGACGTTCG CGCTCGTGAA CCAGTTCTCG
ATGGCGAACG GCAGCATCAT CGGCACCGGG ATCTTCGGCC GCAATGCATA CGTCGGGATC
GAGAGCGACC GCTTCGGCAA CATCACGCTC GGGAACCAGT ACGACTTCAT GGTCGATTCC
CTGTTTGCGA AGGGGAACGC GGTTTCGATG GATATCAGCG GGTTGTACGG GTTCAGGAAT
GGGCCGTTCC AGCGTCTTGC GCTGCCGAAC AATCCGACCG GCGCATTCGA TTGGGATCGA
ACCGCGGGCA GCAAGCCTGT GGCGAATTCG GTCAAATACA GTTCGCCGAC GATTGCCGGT
TTCTCCGGTG GCGTGATGTA TGCGTTCGGC GGCGTGGCCG GTTCCATCGG CGCGGACAAC
GCCGTGAGCG CCGGGTTGAA CTACGAAGTC GGTGCGTTCG GTATCGGCGC GGCCTATACG
AACGAGAAGT ATGGCCCGGC GCCCGGTACA CCGTCGACCA GTGTGCGCAA CTGGGGCGTC
GGGATGCACT ATGACTTCGG CGCGGTGACC GCGAAGGCGT TGCTGACCAC CGTCCACAAT
TCGTTCAACG ACGCCGGTGT GTGGATGGCT GAAGCCGGCG GCACGTGGCG CATCAGGCCG
GACGTTTTTC TCGGCGCGAA GTACATGTAC ATGAAGGGCA ACGAGGCCGT GAACGACAAC
CACGCGCATC AGGTCAGCGT CGCGCTTCAA TACCTGCTGT CGAAGCGGAC GATGGTGTAT
GTGTCCGGCG ACTATCAACG CGCGAACAGC GGCGCGAACG CGCAGATCAA CGGCGTGCTC
GACCCGAACG GGGCGTCGAG TTCAGCGACC CAGGCGGTGG CGCGGATCGG GCTGCATACG
ATGTTTTGA
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| Protein sequence | MKLRFGAAAM LVIAQSAHAQ SSVTLFGLID SGISYVSNEG GGKNVKFDDG IFTPNLFGLR
GTEDLGGGYR ATFALVNQFS MANGSIIGTG IFGRNAYVGI ESDRFGNITL GNQYDFMVDS
LFAKGNAVSM DISGLYGFRN GPFQRLALPN NPTGAFDWDR TAGSKPVANS VKYSSPTIAG
FSGGVMYAFG GVAGSIGADN AVSAGLNYEV GAFGIGAAYT NEKYGPAPGT PSTSVRNWGV
GMHYDFGAVT AKALLTTVHN SFNDAGVWMA EAGGTWRIRP DVFLGAKYMY MKGNEAVNDN
HAHQVSVALQ YLLSKRTMVY VSGDYQRANS GANAQINGVL DPNGASSSAT QAVARIGLHT
MF
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