Gene Bamb_4988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4988 
Symbol 
ID4313879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2005426 
End bp2006427 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID638152831 
ProductFHA domain-containing protein 
Protein accessionYP_776871 
Protein GI115359733 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATAC TCAAGAATGA TTCTTCCGGA GAAGCATGCT TGCTCCGCGC GTATCACGTG 
TTCGGCCGCG ACGACGCGCG CTGCGACACG GTCATCCGGG ATGGGTCGGT GTCGCGTGTC
CATGCCCATA TCCGCTGGGT CGGCGGCCTC TGGGAGCTCT ACGATCACAG CAGCAACGGC
ACGTCGGTAT CGGGCGTCGC GCTGCGCGAC GGCGAGCACG CGGTGCTGCA CCGCGGCGAC
GTGATCCGGT TCGGCAGGGC CGGCATTGCA CCGTGGCGTG TCGATACGCT CGACGATCCG
GCCGATACGC TATGGCCGAT ACGAGGCGCC GCGGCCCCGA TCGTGCTCGC ACCGCGCCAG
ATCCTGCCTG CCCCGGCCGC GCAGCCGGTC ACGATCGTCC GTTCGCCGGC CGGCGAATGG
CTGTGCGACG ACACGTTGCC GCCGCGCGCG CTCCACGACG GCGATGAAGT GTCGACCGGC
GACTTCGCGT GGCGCCTCGC ACTCGTGCGC CACGGCTCGA CGGTGATGCT CGCCGCACCC
GCCGATCCGG CCGCGCCGAC GCAATTGCTC GAATTCTTCG TCAGCCGGAA CGAGGAGCAC
GTGCGCATGC TGCTGCACGT CCGCGGCGGC GTGGTCGACC TCGGCGAGCG CGCCCATCAC
TACAGCCTCG TCACGCTCGC CCGCGCACGC GCGGCCGACA TGCAGGCCGG CTACGACGCC
GCCACGCAAG GATGGATCGA ACTTGACCGG CTGGCACGCA TGCTCGGCAC CGATACGTCC
CATGTCAACG TGCAGATTCA CCGCGCACGG AGCCAGTTCG CGGCGTTGCC GGGGCTGGGC
GCGCGCCAGC TCGTCGAGCG CCGGCGCGGC AGCGTCCGTT TCGGCGATTT TGCATTCCGC
GTCATGCGCG GTGACCACCT CGAATGCCAG TCGGTGCCGG CCGTCGGGCC GCGTATCGAC
GTGCAGCGTG CGGCGCCGGC CCCGGTTGTC CATTGCCCGT GA
 
Protein sequence
MAILKNDSSG EACLLRAYHV FGRDDARCDT VIRDGSVSRV HAHIRWVGGL WELYDHSSNG 
TSVSGVALRD GEHAVLHRGD VIRFGRAGIA PWRVDTLDDP ADTLWPIRGA AAPIVLAPRQ
ILPAPAAQPV TIVRSPAGEW LCDDTLPPRA LHDGDEVSTG DFAWRLALVR HGSTVMLAAP
ADPAAPTQLL EFFVSRNEEH VRMLLHVRGG VVDLGERAHH YSLVTLARAR AADMQAGYDA
ATQGWIELDR LARMLGTDTS HVNVQIHRAR SQFAALPGLG ARQLVERRRG SVRFGDFAFR
VMRGDHLECQ SVPAVGPRID VQRAAPAPVV HCP