Gene Bamb_4731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4731 
Symbol 
ID4313623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1725544 
End bp1726407 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content61% 
IMG OID638152575 
Productalpha/beta hydrolase fold 
Protein accessionYP_776615 
Protein GI115359477 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.807147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCA TCAACGCGGA CACCCAGTCG ATAACGTCGT ATGCACGGGC ACCGAACAAG 
TTCGTCAATG CGGCAGGAAC CCGCTTCGCC TACCGCGAAC TGGGTCCGCA CGGCGGCATT
CCTTTGGTTT TGCTGAACCA TTGGGGCGCG GTGCTGGACA ACTTCGATCC GCGCATCGTC
GATGGCTTGG CGCAAAAACA TCGCGTTATC GCCATCGACT ATCGAGGAAT CGGCTTATCC
GGTGGCATCG CGCCCGTGAC CGTGGACGAG ATGGCGCGCG ACACCATCGC GCTGATTCGC
GCAATGGGTT TCGATCAAGT CGATCTGCTC GGCTTCTCGC TTGGCGGCTT CGTCGCGCAG
GACGTGGCGC TCAAGGCGCC AGGCCTGGTG CGCAAGCTCA TTCTCACTGG CACGGGCCCT
GCCGGCGGTC ACGGTATCGA TCGTGTGGGT GCCGTGTCCA CGCCACTCAT GCTCAAAGGC
CTGCTAACGC TGCGCGATTC GAAGGCGTAT CTGTTCTTCA CGTCCACAAC CAACGGCCAG
CAGGCGGCAA GCGCCTTCTT GAAACGGTTG AAGGAACGTA AGGCTGGCCG CGACAAGGGG
CCGACACCTC GCGCCTTCCT TCGTCAACTC AAGGCGATCA AGGCGTGGGG CCAGCAGGCG
CCCCAGGATA TCGCCAGCCT GCCCATGCCT GTCCTGATCG CCAATGGGGA TAACGACATC
ATGGTGCCCA CCGCGCTCAG CCACGATATG GCCCGCCGCA TACCGCAGGC GCAACTCGTC
ATTTATCAGG ACGCCGGCCA CGGCGGAATC TTCCAGCATT ACGCCAACTT CGTACCCACG
GCACTGGAAT TTCTATCGCA ATGA
 
Protein sequence
MKSINADTQS ITSYARAPNK FVNAAGTRFA YRELGPHGGI PLVLLNHWGA VLDNFDPRIV 
DGLAQKHRVI AIDYRGIGLS GGIAPVTVDE MARDTIALIR AMGFDQVDLL GFSLGGFVAQ
DVALKAPGLV RKLILTGTGP AGGHGIDRVG AVSTPLMLKG LLTLRDSKAY LFFTSTTNGQ
QAASAFLKRL KERKAGRDKG PTPRAFLRQL KAIKAWGQQA PQDIASLPMP VLIANGDNDI
MVPTALSHDM ARRIPQAQLV IYQDAGHGGI FQHYANFVPT ALEFLSQ