Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4543 |
Symbol | |
ID | 4313435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 1495265 |
End bp | 1495894 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152382 |
Product | sarcosine oxidase, gamma subunit |
Protein accession | YP_776427 |
Protein GI | 115359289 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4583] Sarcosine oxidase gamma subunit |
TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAATG AAACGAGAAA TCAGACGCCG GTGGCAGGCG CGGGCGTGAC GCTTGAATCG CCGCTCGTCG GCTCGGCCGA TGTGCTGAAG CCGCATCAGG CGCGCGCATC GAAGAAGTTC ACGCTGCGCG AGCGGCCGTT CCTCGATCTC GTGAACGTGC GCGGCGAGCT GAGCGACCCG GCATTCGTCA GCGCGTTCGA GCGCGTGGTC GGTTGCCGGC CGCCGTCGGC GCCGAACACG GTGGCGCGTG CCGTCGAGTA CGACGTGCTC TGGCTCGGTC CCGACGAGTG GCTCGTGCGC TCGAACGGGC CCGTCCAGGC GGGCGTGCTC GAGGCGCAGC TCGCGGAGGC CGTGCAGGGT TCGTATGCGG CGGCCGTCGA CGTCGGCAGC GGCTACACGG TCGTCGAGGT CAGCGGCGAA CGCGTGCGCG ACGTGATCGC GCGCGGCTGT CCGCTCGATC TGCATCCGCG CGTGCTCAAG CCGGGCCAGT GCGCGCAATC GCACTACTTC AAGTCGCCGA TCACGCTGAT CCCGACCGGC GACGATACGT TCGAGATCGT CCTGCGTCGC AGCTTCGCCG ACTATTTCGT GCGCATCATG CTCGACGCCG CGGCGCCGCT CGCATCATGA
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Protein sequence | MWNETRNQTP VAGAGVTLES PLVGSADVLK PHQARASKKF TLRERPFLDL VNVRGELSDP AFVSAFERVV GCRPPSAPNT VARAVEYDVL WLGPDEWLVR SNGPVQAGVL EAQLAEAVQG SYAAAVDVGS GYTVVEVSGE RVRDVIARGC PLDLHPRVLK PGQCAQSHYF KSPITLIPTG DDTFEIVLRR SFADYFVRIM LDAAAPLAS
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