5 homologs were found in PanDaTox collection
for query gene Bamb_4301 on replicon NC_008391
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008391  Bamb_4301  hypothetical protein  100 
 
 
493 aa  1001    Burkholderia ambifaria AMMD  Bacteria  normal  0.0574645  normal 
 
 
-
 
NC_009484  Acry_2052  hypothetical protein  29.61 
 
 
434 aa  57  0.0000008  Acidiphilium cryptum JF-5  Bacteria  normal  0.208901  n/a   
 
 
-
 
NC_007643  Rru_A2211  porin  24.92 
 
 
362 aa  51.2  0.00004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2212  hypothetical protein  24.19 
 
 
348 aa  46.6  0.001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.541863  n/a   
 
 
-
 
NC_009719  Plav_1282  porin  25.48 
 
 
377 aa  43.5  0.009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
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