Gene Bamb_4278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4278 
Symbol 
ID4313173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1201846 
End bp1203192 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content67% 
IMG OID638152119 
Productglutamine synthetase, catalytic region 
Protein accessionYP_776165 
Protein GI115359027 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.702735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.233785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG TCGTTCCCGT GCTGGTCGAT GAAGTCCGCG CATTCCGGCA GGCGCATCCC 
GAGATCCGTT ATGTCGACCT GATCTGTCTC GACCTGCCGG GCCACTTCTA CGGCAAGCGC
TATCCGATCG ATGCGCTGGA GAAGGTCGCG TCCGGTGCGC TGCTGAAGCT GCCGCAGAAC
TGCGTGCTGC TCGGCACACA GGGCGGCCTC TACAAGATCG GCGATTACTG CTTCAACGAC
GGCGACCCCG ACGCGCCGCG CCGTCTGATC CCCGGCACGC TGAAGCCGGT GCGCTGGGAG
CGGCAGCCGC TCGCGCAGAT GCTGATCAGT TCCGACGGTA CCGATGCGCC GATCGAGTTC
GAGCCGCGCG AGGTGCTCGC GCGCGTGCTG CGGCGGTTCG CGGCGCGCGG GGTCCGGCCG
GTCGTCGCGT TCGAACTCGA GTTCTATCTG TTTGCCGCGC AGCTCGCGGA CGGGATGCCG
CAGTATCCGC GCGACCGCCT GAGCGACGAC CGCGACGATC AGCCGAACAT GCATATCGAA
CGGCTGTCGC GGTTTTCCGA CGTGCTGCAC GAGATGGTCG AGGCGGCGCG CGAGCAAGGT
GTCGACGCGA CGGTGATCAC GGCCGAGCTC GGGCCCGGCC AGTTCGAGAT CAACTTCGGC
CATACCGACG ACGCGTTGCG CGCGGCCGAC TGGTCGGCGC TGTTCTGCCG CAGCACGCGC
GGCGTCGCGT TGCAGCACGG CTATCGCGCG AGCTTCATGG GCAAGCCGTA CCTGCATGCG
CCGGGCAGCG GGATGCATGT GCACGTGAGC CTGTACGACG ATGCGGGTCG CAACCTGCTC
GCCGCGGACG GGCAGCGGCC GCTGCTGCAC GCGGTGGCGG GCTGCCTCGC GCTGCTGCCG
CACTGCATGC CGGTGTTCGC GCCGAATCAC AATGCGTTTC GCCGCTACGG ATCGATGGTG
AACGCGGCGA GCCGTGCAAG CTGGGGCTTC GAGGATCGCG ACGCGTGCAT CAGGATTCCG
GATTCGGATG CGCGCAATCT GCGCATCGAG CATCGGCTCG CGAGCGCGGA CGCGAATCCG
TACCTCGTGC TCGCGGCGAT CCTGGCCGGG ATGGAGCACG GGCTCGATGC GCGGCTCGAG
CCGATCGCGC CGCTCAACGA CGATCGCGGC AGCGGGATCG ATTTTCCGAA GGAGATGCTG
TCGGCCGTCG CGGCGATGCA GGATCATGCG GCCGTGCGCG ACGGGCTCGG CAGCGAGTTC
GTGATGGTGT ATTGCGAGAA CAAGCGGCAG GAGGAACTGG ATTTTCGCAA CGAGATCGGT
GCGCGGGAAT ATCGGTGGTT TCTGTGA
 
Protein sequence
MADVVPVLVD EVRAFRQAHP EIRYVDLICL DLPGHFYGKR YPIDALEKVA SGALLKLPQN 
CVLLGTQGGL YKIGDYCFND GDPDAPRRLI PGTLKPVRWE RQPLAQMLIS SDGTDAPIEF
EPREVLARVL RRFAARGVRP VVAFELEFYL FAAQLADGMP QYPRDRLSDD RDDQPNMHIE
RLSRFSDVLH EMVEAAREQG VDATVITAEL GPGQFEINFG HTDDALRAAD WSALFCRSTR
GVALQHGYRA SFMGKPYLHA PGSGMHVHVS LYDDAGRNLL AADGQRPLLH AVAGCLALLP
HCMPVFAPNH NAFRRYGSMV NAASRASWGF EDRDACIRIP DSDARNLRIE HRLASADANP
YLVLAAILAG MEHGLDARLE PIAPLNDDRG SGIDFPKEML SAVAAMQDHA AVRDGLGSEF
VMVYCENKRQ EELDFRNEIG AREYRWFL