| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4025 |
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| Symbol | |
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| ID | 4312920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 944109 |
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| End bp | 945113 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638151866 |
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| Product | fimbrial protein |
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| Protein accession | YP_775912 |
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| Protein GI | 115358774 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.355446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATT TCCGTCCATC GTTCGTATCG ATCCGAGTGA CGAGCCCGGC ACGCATCGCG
CACACGCGCG ACGCATGCAG CGGCATGGCC CGACGCTGCG CCCGCATGAG CGCGGTTGCC
GCGGCGGTTC TGCTCGCCTG CGTCGCATTC GCGGCCGACG CGAGCGCCGC CTCCCTCTAT
GCGTTCGGGC AGGCCACCGT TTCGAGCCCC GGCAACGCCA CGCCGGGCAC GATCGTCGCA
CGTCATTACT TCACGCCGCA TGACGTTTGC GGCGCGAGCA CCTGCCAGAT CACGAGCATC
ACGATGTACG CCAAAGGCGG CGTGTGGGTG TCCGACGGCC CCGATCTGGA AACCAACGTG
TCCGGACTGT CGACGCGCAT GATCGTCGAC GGTAACGTCG CCGTCTCGTC GACGCGGACG
ACGCTGCGCA ACACGCTCGA AATCATGCTG TTTCGCGACA GCCGGCTGCC GCAGGACGGG
TCGCTCAATT CCGGCATGCT CAGCGCCTAT TACACGATCA ATTACAAGTC CGGCATCCTC
GGCGCGTCGT CGCCGGTCTT CCTCGCCGCG AAGGTCAGTT TCATCAACGG AACGTGCTCG
ATTCCCGACC AGACCGTCAC GCTGCCGTCC GTGCAGCACA ACGTCTTCAA CGGCATCGGT
TCGACCGCCG GCGCGACGGA TTTTCAGGTG CAGTTGAACA ACTGCCCGGC CGGTTACAAC
CGCATCGGCT ATCAAATAGC TCCGCTGGAC GACGTGGTCG CCGGCACGCC GGGCGGGATG
CAGTTGCGCC CGGATGCCAC GGCCAGCGGC ATCGGCATCC AGGTCGCCGA CGCCACGACC
GGCCAGCCGC TGACGCTGAG GAAGTCGCAC ACGGTGACGG GCTACAACCC GGCCACCGGC
GGATCGCCGA CGATCCGGCT GCGTGCGTCC TACCTGCAGA CAGGCGCGAA GGTCGGCAGT
GGTTCGGTTC ACGCGGCCGC GCAGGTTCTG CTCGACTACC AATGA
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| Protein sequence | MFNFRPSFVS IRVTSPARIA HTRDACSGMA RRCARMSAVA AAVLLACVAF AADASAASLY
AFGQATVSSP GNATPGTIVA RHYFTPHDVC GASTCQITSI TMYAKGGVWV SDGPDLETNV
SGLSTRMIVD GNVAVSSTRT TLRNTLEIML FRDSRLPQDG SLNSGMLSAY YTINYKSGIL
GASSPVFLAA KVSFINGTCS IPDQTVTLPS VQHNVFNGIG STAGATDFQV QLNNCPAGYN
RIGYQIAPLD DVVAGTPGGM QLRPDATASG IGIQVADATT GQPLTLRKSH TVTGYNPATG
GSPTIRLRAS YLQTGAKVGS GSVHAAAQVL LDYQ
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