| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3549 |
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| Symbol | |
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| ID | 4312445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 371488 |
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| End bp | 373113 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151391 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_775437 |
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| Protein GI | 115358299 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.769299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGGCC AAGGCAACAC ACACCCTTCC GTCCCGCTTT CCCGTTCCGT GCCCGCCGAC
GGCGGTCACG GCAAGTTCAA GAAACAGCTG TCGCTGACCG ACCTGACGTT CATCGGTCTC
GGCGCGATCT TCGGTTCGGG GTGGCTGTTC GCCGCGAGTC ACGTGTCGAC GATCGCCGGC
CCGGCCGGCA TCTTCTCGTG GCTGCTCGGC GGCTTCTCGG TGCTGCTGCT GGGCATCGTC
TACTGCGAGC TCGGCGCCGC GCTGCCGCGC GCGGGCGGCG TGGTCCGCTA CCCGGTGTTC
TCGCACGGCC CGCTGCTCGG CTACCTGATG GGCTTCATCA CGCTGATCGC GTTCTCGAGC
CTGATCGCGA TCGAAGTGGT CGCCGCGCGC CAGTATGCGG CCGCGTGGTT CCCCGGCCTC
ACCAAGGCCG GCTCGAGCGA CCCGACGACG CTCGGCTGGC TCGTGCAGGC CGGGCTGCTG
TGCTTCTTCT TTTACCTGAA CTATTCGAGC GTGAAGACGT TCGCGAAGGC GAACAACGTC
ATCAGCATCT TCAAGTTCAT CGTGCCGCTG TCGGTGATCG CGGTGCTGTT CACGTTCTTC
AAGCCCGCCA ACCTGACCCT GCACGGCTTC GCGCCGTTCG GCATGCCGGG CATCGAGATG
GCCGTGTCGG CCGGCGGGAT CATCTTCGCG TACCTGGGCC TCACGCCGAT CGTGTCGGTC
GCGAGCGAAG TGCGCAATCC GCAGCGCACG ATTCCGATCG CGCTGATCCT GTCGATCCTG
CTGTCGACGC TGATCTACGT GCTGCTGCAG CTCGCGTTCA TCGGCAGCAT CCCGACCGAC
ATGCTCGCCG CCGGCTGGCA CGACGTGAGC AAGGCGTTCT CGCTGCCGTA CCGCGACATC
GCGCTCGCGC TCGGCGTGGG CTGGCTCGCG GTGATGGTCG TCGCCGACGC GATGATCTCG
CCGAGCGGCT GCGGCAACAT CTACATGAAC GCGACGCCGC GCGTCGTCTA CGGCTGGGCG
AAGACGGGCA CGTTCTTCAA GGTGTTCACG CGCGTCGACG AAGCGTCGGG CATCCCGCGC
GCGGGCCTGT GGCTCACGTT CGGCCTCTCG ATCTTCTGGA CGATGCCGTT CCCGTCGTGG
GAAGCGCTGA TCAACATCGT GTCGGCCGCG CTCGTGCTGA GCTATGCGGT CGCGCCCGTG
TCGGTCGCCG CGCTGCGGCG CACCGCGCCC GACCTGCCGC GGCCGTTCCG CGCGGTGGCG
TTCGGCATCA CCGGCCCCGC GTCGTTCGTG ATCGCCGCGC TGATCGTCTA CTGGTCGGGC
TGGGGCACGG TGTCCTGGCT GCTCGGCCTG CAGATCGTGA TGTTCGTGAT CTATCTCGCA
TGCCGCCGCT GGGTGCCCAC CGCGCATCTG AGCATCGCCG AGCAGGTGCG TTCGTCCGCG
TGGCTGATCG CGTTCTACGC GGCCATGATC GTGCTGTCGT ACTTCGGCGG CTTCGGCGGC
ACGGGCCAGC TCGCGCATCC GTACGACACG GTCGTCGTCG CGGCCGTCGC GCTCGTCATC
TTCTACTGGG GCGCCAACAC CGGCATCCGT TCCGACAAGC TGCAGCTCGA AGACGACGAA
GACTGA
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| Protein sequence | MPGQGNTHPS VPLSRSVPAD GGHGKFKKQL SLTDLTFIGL GAIFGSGWLF AASHVSTIAG
PAGIFSWLLG GFSVLLLGIV YCELGAALPR AGGVVRYPVF SHGPLLGYLM GFITLIAFSS
LIAIEVVAAR QYAAAWFPGL TKAGSSDPTT LGWLVQAGLL CFFFYLNYSS VKTFAKANNV
ISIFKFIVPL SVIAVLFTFF KPANLTLHGF APFGMPGIEM AVSAGGIIFA YLGLTPIVSV
ASEVRNPQRT IPIALILSIL LSTLIYVLLQ LAFIGSIPTD MLAAGWHDVS KAFSLPYRDI
ALALGVGWLA VMVVADAMIS PSGCGNIYMN ATPRVVYGWA KTGTFFKVFT RVDEASGIPR
AGLWLTFGLS IFWTMPFPSW EALINIVSAA LVLSYAVAPV SVAALRRTAP DLPRPFRAVA
FGITGPASFV IAALIVYWSG WGTVSWLLGL QIVMFVIYLA CRRWVPTAHL SIAEQVRSSA
WLIAFYAAMI VLSYFGGFGG TGQLAHPYDT VVVAAVALVI FYWGANTGIR SDKLQLEDDE
D
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