Gene Bamb_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3005 
Symbol 
ID4310592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3325382 
End bp3325819 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content67% 
IMG OID638150845 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_774895 
Protein GI115353056 
COG category[R] General function prediction only 
COG ID[COG3565] Predicted dioxygenase of extradiol dioxygenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCTA CGCCCGCCGG CGCGCTGCGC CCGTTCCATC TCGCCTTTCC CGTATCGAGC 
CTCGCCGACG CCCGCGCGTT CTACGGCGGC CTGCTCGGCT GCCCCGAGGG CCGCAGCTCG
GATCACTGGG TCGACTTCGA CTTTTTCGGC CACCAGCTCG TCGCGCATCT CGCGCCGGAC
GAAACCGGCG CGAGCGCGGT GAATCCGGTC GATGGCGACA ACGTGCCCGT GCGCCATTTC
GGCGTCGTGC TGTCGATGGA CGAATGGCAC GCGCTCGCCG ACAAACTGAA GGCCGCGCAC
ACGCGCTTCG TGATCGCGCC GCACATCCGT TTCAAGGGCG AGGTCGGCGA GCAAGCGACG
ATGTTCTTCC TCGATCCGTG CGGCAACGCG CTCGAATTCA AGGCGTTCGC CGACATCGGC
CAGCTGTTCG CGAAGTAA
 
Protein sequence
MSATPAGALR PFHLAFPVSS LADARAFYGG LLGCPEGRSS DHWVDFDFFG HQLVAHLAPD 
ETGASAVNPV DGDNVPVRHF GVVLSMDEWH ALADKLKAAH TRFVIAPHIR FKGEVGEQAT
MFFLDPCGNA LEFKAFADIG QLFAK