| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2966 |
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| Symbol | |
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| ID | 4310553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3269504 |
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| End bp | 3272221 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638150806 |
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| Product | methionine synthase |
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| Protein accession | YP_774856 |
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| Protein GI | 115353017 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC ACATGATGCG CCTTGCCGGC CTCGAGCCGT TCAACGTCAC GTCCGGGACG
CTCTTCATCA ACGTCGGCGA ACGCACCAAC GTCACCGGCT CGAAGGCGTT CGCGCGGATG
ATCCTGAACG GCCAGTTCGA CGAGGCGCTC GCCGTCGCGC GCCAGCAGGT CGAGAACGGC
GCGCAGGTGA TCGACATCAA CATGGACGAA GCGATGCTCG ATTCGAAGGC GGCGATGGTG
CGCTTCCTGA ACCTGATCGC ATCCGAGCCG GACATCGCGC GCGTGCCGAT CATGATCGAC
TCGTCGAAGT GGGAAGTGAT CGAGGCCGGC CTCAAGTGCG TGCAGGGCAA GGCGATCGTG
AACTCGATCT CGCTGAAGGA AGGCGAGGAA GCGTTCCGCC ATCACGCGAA CCTGATCCGC
CGCTACGGCG CGGCCGCGGT CGTGATGGCG TTCGACGAGA CGGGCCAGGC CGATACCTAC
GCGCGCAAGA CCGAGATCTG CAAGCGCTCG TACGACTTTC TCGTGAACGA AGTCGGCTTC
CCGCCGGAAG ACATCATCTT CGACCCGAAC ATCTTCGCGG TCGCGACCGG CATCGAGGAG
CACAACAACT ACGCGGTCGA CTTCATCGAG GCGACCCGCT GGATCAAGCA GAACCTGCCG
TACGCGAAGG TGAGCGGCGG CGTGTCGAAC GTGTCGTTCT CGTTCCGCGG CAACGACCCG
GTGCGCGAGG CGATCCACAC CGTGTTCCTG TACCACGCGA TCCAGGCGGG GATGGACATG
GGCATCGTGA ACGCGGGCCA GCTCGGCGTG TACGCCGATC TCGACGCGGA ACTGCGCGAG
CGGGTCGAGG ACGTGATCCT GAACCGCCGT GACGATTCCA CCGACCGCCT GCTCGAAATC
GCCGACAAGT TCAAGGCGGG CGGCGCGAAG AAGGAAGAGA ACCTCGAGTG GCGCAATCAG
CCGGTCGAGA AGCGGCTTTC GCATGCGCTC GTGCACGGCA TCACGAACTT CATCGTCGAG
GATACGGAAG AGGTGCGCGC GAAGATCGCC GCTGCCGGCG GCCGCCCGAT CAACGTGATC
GAAGGCCCGC TGATGGACGG GATGAACATC GTCGGCGACC TGTTCGGCCA GGGCAAGATG
TTCCTGCCGC AGGTCGTGAA GTCGGCGCGC GTGATGAAGC AGGCCGTCGC GCACCTGATC
CCGTTCATCG AGGAAGAAAA ACGGCTGCTC GCCGAAGCGG GCGGCGACGT GCGCGCGAAG
GGCAAGATCG TCATCGCGAC CGTGAAGGGC GACGTGCATG ACATCGGCAA GAACATCGTG
TCGGTCGTGC TCCAGTGCAA CAACTTCGAA GTCGTCAACA TGGGCGTGAT GGTCCCGTGC
AACGAGATCC TCGCGAAGGC GAAGGTCGAG GGCGCGGACA TCATCGGGCT GTCTGGCCTC
ATCACGCCGA GCCTCGAGGA AATGGCGTAC GTCGCGTCCG AAATGCAGCG CGACGACTAC
TTCCGCGTGA AGAAGATTCC GCTCCTGATC GGCGGCGCGA CGACCTCGCG CGTGCACACG
GCCGTGAAGA TCGCGCCGCA TTACGAAGGC CCGGTCGTCT ACGTGCCCGA CGCATCGCGC
TCGGTGTCGG TCGCATCGAG CCTGCTGTCG GACGAAGGCG CGACGAAGTA CCTCGACGAA
TTGAAGTCGG ATTACGAACG GATCCGCGAA CAGCACGCGA ACCGCAAGGC CCAGCCGATG
GTCACGCTCG CCGAGGCGCG CGCGAACAAG GCGAAGCTCG ACTGGGCGGG CTACCGGCCC
GTGAAGCCGA AGTTCATCGG CCGCCGCGTG TTCAAGAACT ACGACCTGAA CGAGCTCGCG
AACTACATCG ACTGGGGCCC GTTCTTCCAG ACCTGGGATC TCGCGGGCCC GTACCCGGCG
ATCCTGAACG ACGAGATCGT CGGCGAATCG GCGCGGCGCG TGTTCTCCGA CGCGAAGTCG
ATGCTCGCCC GCCTGATCCA GGGCCGCTGG CTCACCGCGA ACGGCGTGAT CTCGCTGCTG
CCGGCGAACA CGGTCAACGA CGACGACATC GAGATCTACA CCGACGATTC GCGCTCCAAA
GTGCTGCTCA CGTGGCGCAA CCTGCGCCAG CAGAGCGTGC GTCCGGTGGT CGACGGCGTG
ATGCGCCCGA ACCGCTCGCT CGCCGACTTC ATCGCGCCGA AGGAATCGGG CGTCGCCGAC
TACATCGGGA TGTTCGCGGT CACGGCCGGC CTCGGCGTCG ACGTGAAGGA AAAGCAGTTC
GAGGCCGACC ACGACGACTA CAGCGCGATC ATGCTGAAGG CGCTCGCCGA CCGCTTCGCG
GAAGCATTCG CCGAGGCGAT GCACGCGCGC GTGCGCCGCG AGCTGTGGGG CTATGCGAGC
GGCGAGACGC TCGACAACGA TGCGCTGATC GCCGAAAAGT ACGCGGGCAT CCGCCCGGCG
CCCGGCTACC CGGCCTGCCC CGACCACCTC GTGAAGCGCG ACATGTTCGC CGCGCTGCAT
GCGGAAGAGA TCGGAATGAG CGTGACCGAA TCGCTGGCGA TGCTGCCGGC GGCGAGCGTG
TCGGGCTTCT ATCTCGCGCA TCCGGACAGC CGCTATTTCT CGGTCGGCAA AATCGGGCAG
GATCAGCTCG ACGACTACGC GCGGCGGATG TCGCTGTCGC TCGCCGACGC CCGGCGCGCG
CTCGCGCCGC AGCTCTGA
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| Protein sequence | MTDHMMRLAG LEPFNVTSGT LFINVGERTN VTGSKAFARM ILNGQFDEAL AVARQQVENG
AQVIDINMDE AMLDSKAAMV RFLNLIASEP DIARVPIMID SSKWEVIEAG LKCVQGKAIV
NSISLKEGEE AFRHHANLIR RYGAAAVVMA FDETGQADTY ARKTEICKRS YDFLVNEVGF
PPEDIIFDPN IFAVATGIEE HNNYAVDFIE ATRWIKQNLP YAKVSGGVSN VSFSFRGNDP
VREAIHTVFL YHAIQAGMDM GIVNAGQLGV YADLDAELRE RVEDVILNRR DDSTDRLLEI
ADKFKAGGAK KEENLEWRNQ PVEKRLSHAL VHGITNFIVE DTEEVRAKIA AAGGRPINVI
EGPLMDGMNI VGDLFGQGKM FLPQVVKSAR VMKQAVAHLI PFIEEEKRLL AEAGGDVRAK
GKIVIATVKG DVHDIGKNIV SVVLQCNNFE VVNMGVMVPC NEILAKAKVE GADIIGLSGL
ITPSLEEMAY VASEMQRDDY FRVKKIPLLI GGATTSRVHT AVKIAPHYEG PVVYVPDASR
SVSVASSLLS DEGATKYLDE LKSDYERIRE QHANRKAQPM VTLAEARANK AKLDWAGYRP
VKPKFIGRRV FKNYDLNELA NYIDWGPFFQ TWDLAGPYPA ILNDEIVGES ARRVFSDAKS
MLARLIQGRW LTANGVISLL PANTVNDDDI EIYTDDSRSK VLLTWRNLRQ QSVRPVVDGV
MRPNRSLADF IAPKESGVAD YIGMFAVTAG LGVDVKEKQF EADHDDYSAI MLKALADRFA
EAFAEAMHAR VRRELWGYAS GETLDNDALI AEKYAGIRPA PGYPACPDHL VKRDMFAALH
AEEIGMSVTE SLAMLPAASV SGFYLAHPDS RYFSVGKIGQ DQLDDYARRM SLSLADARRA
LAPQL
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