Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1792 |
Symbol | |
ID | 4311130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1980051 |
End bp | 1981379 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638149606 |
Product | homoserine dehydrogenase |
Protein accession | YP_773682 |
Protein GI | 115351843 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.075233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACCGA TCAAAGTTGG CCTGTTGGGC TTCGGCACCG TCGGCAGCGG CACCTTCACG GTGCTGAACC GCAACCAGGA AGAAATCAAG CGCCGCGCGG GGCGCGGCAT CGAGGTCGCG CGCATTGCCG TGCGCAACCC GGCCAAGGCG CAGGCCGCGC TCGGCGGCGA CACCGGCGGC GCGCAGATCA CCGATGATTT CAACGCGGTG GTGGACGACC CGTCGATCGC GATCATCGCC GAGATGATCG GCGGCACGGG CATCGCGCGC GAGCTCGTGC TGCGCGCGAT CGCGAACGGC AAGCACGTCG TCACGGCAAA CAAGGCGCTG CTCGCGGTGC ACGGCACCGA GATCTTCGAA GCGGCGCGCG CGAAGGGCGT GATGGTCGCG TTCGAGGCGG CCGTGGCCGG CGGCATTCCG ATCATCAAGG CGCTGCGCGA AGGCCTGACC GCCAACCGCA TCCAGTACAT CGCGGGCATC ATCAACGGCA CGACGAACTA CATCCTGTCG GAAATGCGCG ACCGCGGGCT CGACTTCGCG ACCGCGCTGA AGGCCGCGCA GGAGCTCGGC TACGCGGAAG CCGATCCGAC CTTCGACATC GAAGGCGTCG ACGCCGCGCA CAAGGCGACC ATCATGAGCG CGATCGCGTT CGGCGTGCCG GTCCAGTTCG ACCGCGCGTA CGTCGAAGGC ATCAGCAAGC TCGACGCGAC CGACATCCGC TACGCGGAAG AGCTCGGCTA CCGGATCAAG CTGCTCGGCA TCACGCGCCG CGCCGAAAAC GGCATCGAGC TGCGCGTGCA TCCGACGCTG ATTCCCGAGA AGCGCCTGCT CGCAAACGTC GAAGGCGCGA TGAACGCAGT CGTCGTGCAC GGCGACGCGG TCGGCACGAC GCTGTACTAC GGCAAGGGCG CGGGCGCGGA ACCGACCGCG TCGGCGGTCG TCGCGGATCT CGTCGACGTC ACGCGCCTGC ATACGGCCGA CCCCGAGCAT CGCGTGCCGC ATCTCGCGTT CCAGCCGGAC CGCCTGTCGA ACACGCCGAT CCTGCCGATC GACGAAGTGA CGAGCGGCTA CTACCTGCGC CTGCGCGTGG CCGACCAGAC GGGCGTGCTC GCGGACATCA CGCGCCTGCT CGCCGAGACG GGCATCTCGA TCGACGCGCT GCTGCAGAAG GAATCGGAGC AGGTCGACGA CGCGAACGGC GAAACCGACA TCGTCCTGAT CACGCACGAG ACGCTCGAGA AGCACGTCAA CAAGGCGATC GCGCAGATCG AAAGCCTCGC GACGGTGGTC TCGAAGGTGA CGAAGCTGCG CATGGAAGCG CTGAACTGA
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Protein sequence | MEPIKVGLLG FGTVGSGTFT VLNRNQEEIK RRAGRGIEVA RIAVRNPAKA QAALGGDTGG AQITDDFNAV VDDPSIAIIA EMIGGTGIAR ELVLRAIANG KHVVTANKAL LAVHGTEIFE AARAKGVMVA FEAAVAGGIP IIKALREGLT ANRIQYIAGI INGTTNYILS EMRDRGLDFA TALKAAQELG YAEADPTFDI EGVDAAHKAT IMSAIAFGVP VQFDRAYVEG ISKLDATDIR YAEELGYRIK LLGITRRAEN GIELRVHPTL IPEKRLLANV EGAMNAVVVH GDAVGTTLYY GKGAGAEPTA SAVVADLVDV TRLHTADPEH RVPHLAFQPD RLSNTPILPI DEVTSGYYLR LRVADQTGVL ADITRLLAET GISIDALLQK ESEQVDDANG ETDIVLITHE TLEKHVNKAI AQIESLATVV SKVTKLRMEA LN
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