| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1482 |
|---|
| Symbol | |
|---|
| ID | 4309566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1626539 |
|---|
| End bp | 1627021 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638149298 |
|---|
| Product | HxlR family transcriptional regulator |
|---|
| Protein accession | YP_773374 |
|---|
| Protein GI | 115351535 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGG ATGACATCGG TACGCTGAAC TGTTCGGTCG CGCGCACGCT CGCCGTGCTC
GGCGATCGCT GGACCATGCT GATCCTGCGC AACGCCTTTC TCGGCTGCCG CCGCTTCGAT
GCATTCCAGA CACAACTGGG CCTCACGCGC CACGTGCTGG CCGAGCGGCT CGCGCGCCTC
GTCGACGAAG GCGTGCTGGT CAAGCGCGCG TATCAGGAGC GGCCGCCGCG CTTCGAATAC
CGGTTGACCG AAAAAGGCCT CGATCTCTAT CCTGCCCTGC TCGCGTTGAT GACATGGGGC
GACCGCTGGA AGGACGACGG CCAGGGACCG CCCCTGCAGT TGCGGCATCG CAACTGTGGT
CAACTGATGC ATGCAGTCGC GGTGTGCTCG GCATGTGGCG AGCCGCTCGA CGCGCACGAC
GTGCAGCCGG AACCCGGGCC GGGGTGGGTC GCGCCTGAGG CGGCGGGGCC GGTCGAGTCG
TGA
|
|---|
| Protein sequence | MKWDDIGTLN CSVARTLAVL GDRWTMLILR NAFLGCRRFD AFQTQLGLTR HVLAERLARL
VDEGVLVKRA YQERPPRFEY RLTEKGLDLY PALLALMTWG DRWKDDGQGP PLQLRHRNCG
QLMHAVAVCS ACGEPLDAHD VQPEPGPGWV APEAAGPVES
|
|---|
| |