| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1469 |
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| Symbol | |
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| ID | 4309920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1615694 |
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| End bp | 1616728 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638149284 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_773361 |
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| Protein GI | 115351522 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0655175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCAC CGTCCTCGCT TCCTCCCCGC CGCGTTTCAG TGGCGCCCAT GCTCGACTGG
ACCGACCGCC ATTGCCGGTC GTTCCATCGC ACGCTGACGC GCGACACGTG GCTGTATACG
GAAATGATCA CCACGGGCGC GCTGCTGTTC GGCGACGCGC AGCGGCATCT GGCGTTCACG
CCGAACGAAT CGCCGGTCGC GCTGCAGTTG GGCGGCAGCG AGCGGGACGA TCTCGCGCGC
GCCGCGAAAC TCGGCGAGCA ATGGGGCTAT GACGAGATCA ACCTGAATTG CGGCTGTCCG
TCTGAGCGGG TGCAGCGTGG CGCATTCGGC GCGTGCTTGA TGAACGAGCC GCAGCTCGTC
GCCGACTGCG TGAAGGCGAT GCGCGATGCG GTGTCGGTGC CGGTCACGGT CAAGCACCGG
ATCGGCGTCG ACGCGGTCGA GGATTATGCG TTCGTGCGCG ACTTCGTCGG CAAGGTGGCG
GAAGCGGGCT GCGAGACGTT CGTCGTGCAC GCGCGCAATG CGATCCTGAA GGGGCTGTCG
CCGAAGGAGA ACCGCGAGAT CCCGCCGCTC AAGTACGACT ATGCGTATCA ACTGAAGCGC
GATTTTCCGT CGCTGGAGAT CGTGATCAAC GGCGGGATCA AGACGCTCGA CGAAGTCGCG
CAGCATCTCG AGCATGTCGA CGGCGTGATG CTTGGCCGCG AGGCTTATCA CAACCCGTAT
GTACTCGCGG GCGTCGATGC GCGCTTCTAT GGTTCGACCG CGGCGGTGCC GACGCGCGAA
GAGGCCGAGG CGAAACTGAT CGAATACTGC GCGGCGGAAT TGAAGCGCGG TACGTATCTC
GGCGCGATCG TCCGGCACGC ACTCGGGCTG TATCGCGGCG TCGGCGGTGC ACGCGGCTGG
CGTCGCGTGC TGTCGGACAA CAAGAGGCTC GCGCGCGGCG ATCTGGCCGT GTTCGACGAG
GCGCGCACGC ATCTGAACGA CGCGATCGAA AATTTTGAAA AAAATGCTTT GCAAGACGGA
AAAGTGTTCG TATAA
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| Protein sequence | MSAPSSLPPR RVSVAPMLDW TDRHCRSFHR TLTRDTWLYT EMITTGALLF GDAQRHLAFT
PNESPVALQL GGSERDDLAR AAKLGEQWGY DEINLNCGCP SERVQRGAFG ACLMNEPQLV
ADCVKAMRDA VSVPVTVKHR IGVDAVEDYA FVRDFVGKVA EAGCETFVVH ARNAILKGLS
PKENREIPPL KYDYAYQLKR DFPSLEIVIN GGIKTLDEVA QHLEHVDGVM LGREAYHNPY
VLAGVDARFY GSTAAVPTRE EAEAKLIEYC AAELKRGTYL GAIVRHALGL YRGVGGARGW
RRVLSDNKRL ARGDLAVFDE ARTHLNDAIE NFEKNALQDG KVFV
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