| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1408 |
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| Symbol | |
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| ID | 4311508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1551895 |
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| End bp | 1552782 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638149219 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_773300 |
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| Protein GI | 115351461 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCA TCGATGAAGT CGCGAAAGTG GCCGGCATGG TGGCGATGGC TGGCCTGCTC
TGCGCGTGTT CGGCGTTCAA GGAAAGCGGG TACGGTGTTG GCCCGCAAGC CGAGCGTGCG
GCATTGATGG ACGCCGCGGC CCAGAAACAG TCAGCACCCG ATACGCCCGG CATGTATCTG
GGCCTGATCG AGCGGATGCA GTCGCAAGGA CTGTATTACG CGTCGCTCGC GCATATCGAT
GCGTACGAGA AGCAGTACGG TGCGTCACCG CAGACCATCC TTCTGCGCGC CGATGCGTTG
CGCATGACCG ACCAGCCGGC CGCGAGCACG GCTGTCTATA CGCAACTGCT CAACACGCCG
CTGGCGTCGC GCGGGTATCG CGGGCTGGGG CTGATCGCCG GTGCGGCGGG CGATTTTCCG
CGCGCCGCGC AGGCATTGGC GCAGGCGACG GTGCTGGCAC CGACCGATGC CGCGACGCTG
TCGGATCTCG CCTACGCAAA ATTGCGCGGC GGTGATATCG ACGGTGCGCG CATCCCGTTG
ATGAAGGCGG CTGAACTCGA CCAGAACAAT CCAAAGATCA TCAGCAACCT GGTGCTGTAC
CTGCTCGCGT CCGGCCGTGC GCGCGACGCG CAGCGGCTCA TGGCACAGCA GAAGCTGTCG
GCCGACGTGC GCAACGACAT CCGCGGCGAC GCGATGAAAA TCACGGCGGC AGCGCGTGCG
TGGCGCCGCG CGGCACCGCC ATCGGCCTCG GTCGCGACGG TGACGCCGGT CGGCTCGGGC
AGCGTCGTCG ACGTGTCGGG CGCCGATGTC TCGCGGCGGC CGTCGCCCGT CGCAAACATT
CAGGGATTCG ATCCCACCGC GCCGTTGCTG CAACGGTTCG CACAATGA
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| Protein sequence | MKRIDEVAKV AGMVAMAGLL CACSAFKESG YGVGPQAERA ALMDAAAQKQ SAPDTPGMYL
GLIERMQSQG LYYASLAHID AYEKQYGASP QTILLRADAL RMTDQPAAST AVYTQLLNTP
LASRGYRGLG LIAGAAGDFP RAAQALAQAT VLAPTDAATL SDLAYAKLRG GDIDGARIPL
MKAAELDQNN PKIISNLVLY LLASGRARDA QRLMAQQKLS ADVRNDIRGD AMKITAAARA
WRRAAPPSAS VATVTPVGSG SVVDVSGADV SRRPSPVANI QGFDPTAPLL QRFAQ
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