Gene Bamb_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0542 
Symbol 
ID4309277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp608834 
End bp609841 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content70% 
IMG OID638148336 
Productallantoicase 
Protein accessionYP_772435 
Protein GI115350596 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4266] Allantoicase 
TIGRFAM ID[TIGR02961] allantoicase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0830654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCCC CCATCCTCGA TCCGAACGCG CCGGCTTTCA CGCGGCGCTA CATGAACCTC 
GCCGACCCGC GCCTGGGCGC GCAGGCGCTC TTCGCGAGCG ACGAATTCTT CGCGCCGAAG
GAGCGCATGC TCAATCCCGA GCCGGCCGTG TTCATCCCCG GCAAGTATGA CGATCACGGC
AAGTGGATGG ACGGCTGGGA AACGCGCCGC AAGCGCACCA CCGGCCACGA CTTCTGCGTG
GTCCGGCTCG CGCGGCCGGG CGTGATCTAC GGCGTCGATC TCGATACGAG CCACTTCACC
GGCAACTTCC CGCCGGCTGC GTCGATCGAC GCCTGCGCGG TGGACGGCGA TACGCCGCCG
GAGGACGCCG AATGGCGTAC GCTCGTGCCC GCGACGACGC TGCAGGGCAA TTCGCATCAC
TATGTCGGCG TCGACGACGC GCAACCGGTC ACGCACCTGC GCGTGAACCT GTATCCGGAC
GGCGGGCTCG CGCGCCTGCG CGTGTACGGC CAGCCGCAGC GCGACTGGCG CCACGTACCG
GCGGGCGAGC TCGTCGATCT CGCGGCGATC GAGAACGGCG GCTACCTGGT GGCCGCGAAC
AACCAGCACT TCGGCGCGGC CTCGCAGATG CTGATGCCGG GGCGCGGCGC GAACATGGGC
GACGGCTGGG AAACGCGGCG GCGCCGCGAG CCCGGCAACG ACTGGGCGAT CGTCGCGCTG
GCGCGGCCGG GCATCATCCG GCGCGTCGAG GTCGATACGG CATTCTTCAA GGGCAACTTC
CCCGACCGCT GTTCGCTGCA GGCCGCGCGG GTCGCGGGCG GCACCGACGA CTCGCTCGTC
ACGCAGGCGA TGTTCTGGGC CGAACTGCTC GGCGAGCAGA AGCTGCAGAT GGACCACGTG
CATACGTTCG ACCAGCTCGC GGCACTCGGC CCCGTCACGC ACGTGCGCTT CAACATCTTC
CCGGACGGCG GCGTGTCGCG CCTGCGTCTG TGGGGCGAGC CGGCTTGA
 
Protein sequence
MAAPILDPNA PAFTRRYMNL ADPRLGAQAL FASDEFFAPK ERMLNPEPAV FIPGKYDDHG 
KWMDGWETRR KRTTGHDFCV VRLARPGVIY GVDLDTSHFT GNFPPAASID ACAVDGDTPP
EDAEWRTLVP ATTLQGNSHH YVGVDDAQPV THLRVNLYPD GGLARLRVYG QPQRDWRHVP
AGELVDLAAI ENGGYLVAAN NQHFGAASQM LMPGRGANMG DGWETRRRRE PGNDWAIVAL
ARPGIIRRVE VDTAFFKGNF PDRCSLQAAR VAGGTDDSLV TQAMFWAELL GEQKLQMDHV
HTFDQLAALG PVTHVRFNIF PDGGVSRLRL WGEPA