| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6255 |
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| Symbol | |
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| ID | 6182810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 843093 |
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| End bp | 844397 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689382 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001816241 |
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| Protein GI | 172065529 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCTA GAACGCTGAT CGCCTCCGCC AACGGCGTGC GCATGGGCAC GCTGACCGAC
GACAAAGGTA TCTGGTCGTT CGCATACGAT CCGCAGTGGC TCGCGTCCGC GGCCGCGTAT
CCGCTGTCGC CGGCGTTCGC GCTGCGCGCG GATACCTTCA CCGACACGTC GACCGATCGC
CCCGTGCAGT GGTTCTTCGA CAACCTGCTG CCCGAGGAAG GCATGCGCAC GTCGCTCGCC
CGCGAGGCGA AGGTCGATGC CGCCGACGCA TGGGGCCTGC TCGCATACTT CGGGCGCGAA
TCGGCCGGCG CGCTGACGCT GCTCGCCGAC GGCGAGCGGG AAGCGCCCGG CAGCCTGCAG
CCGCTGTCGC TCGACGAACT CGAACGCCGG ATCCAGGCGA TGCCCGAGCG CGCGCTGACG
GCCACCGCGC CCAAGCGCAT GTCGGCGGCC GGCGCGCAGC AGAAGCTGCT GCTGGTGCTG
CGCGGCGACG CGCCCGACTA CACGCTGTAC GAGCCGGTCG GCAGCGAGCC GTCGATGCAT
CTGCTCAAGC CGGACATGCG CGCGGCCGGC TACCCGCACT CGGCGATCAA CGAATTCTTC
TGCATGAAGC TCGCGAGGAA GATGGGGCTC GACGTGCCCG ACGTGCACTT CCTGCGTGCG
CCGTCCGCGT GCTACGTGAT CGACCGGTTC GATCGCGACG TCGCGTCGGC GCCCGCTGGG
CGCGTGCATA CGATCGACGC GATGCAGCTG CTCAACTACG ACCGCGGCTT CAAGTATCAG
CGGGCGAATG CGCAGGAGCT GGCGCGCGCG ATCGAGCGCA CCAGCACGCG CGCGCTGGCG
CGCCTGTCGG TGTTCCGCTG GACCGTGTTC AACGTGGTGG TGGGCAATGC CGACGCGCAT
CTGAAGAACC TGTCGTTCTT CGTCGACGCG CGCGGCTACC GGCTCGCACC GTTCTACGAC
ATCGTCAGCA CGGTCGTCTA TCACACGCCG ACGCACCGGC CCGACCATCG CGGCGATCAT
TGGCCGCACT GCGAACTGAC GATGCCGCTC GGCAGCGCGA CGCGGTTTGC CGATATCGAT
GTGGATGCGT TGATCGCATT CGGCGAGGCG CTCGGGCTCA GAGGCAAGGC GGCGGCCAGC
GAACTGCGGC GCTTTCTCGA GCCGCTCGAT CGCCACGTCG CGCAGACGCT CGACGAAGTG
CGGGAAATCG CGCGGCCGGA CGCCGGGGAG ATGCGGTTGC TGAATTCGAT CGTCGCGATG
CCGATCGCGG AGATGGGGCG GGCGCTTCGG TCGATGCGGG ATTGA
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| Protein sequence | MAARTLIASA NGVRMGTLTD DKGIWSFAYD PQWLASAAAY PLSPAFALRA DTFTDTSTDR
PVQWFFDNLL PEEGMRTSLA REAKVDAADA WGLLAYFGRE SAGALTLLAD GEREAPGSLQ
PLSLDELERR IQAMPERALT ATAPKRMSAA GAQQKLLLVL RGDAPDYTLY EPVGSEPSMH
LLKPDMRAAG YPHSAINEFF CMKLARKMGL DVPDVHFLRA PSACYVIDRF DRDVASAPAG
RVHTIDAMQL LNYDRGFKYQ RANAQELARA IERTSTRALA RLSVFRWTVF NVVVGNADAH
LKNLSFFVDA RGYRLAPFYD IVSTVVYHTP THRPDHRGDH WPHCELTMPL GSATRFADID
VDALIAFGEA LGLRGKAAAS ELRRFLEPLD RHVAQTLDEV REIARPDAGE MRLLNSIVAM
PIAEMGRALR SMRD
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