Gene BamMC406_5957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5957 
Symbol 
ID6182249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp506429 
End bp507469 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content57% 
IMG OID641689087 
Productlipase class 3 
Protein accessionYP_001815946 
Protein GI172065234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCA GCAGACTCGA GCAAATGCAG GCCAATCTCA CGTTGGCCTA TGTTCTTAAC 
AACGCAGCAG TCGACGGAGC CGGGAGGGAA CTCAAGCATC CGACTGCGTC GCAGGTCAAA
AAGATCATCG TGGATCGCCT GAACCGATCG ACGATGACCC GGAACGATCG ATTCGAAATT
GCGTGGGGGC CGGCGATCGT ATTGGATCCG AATGGCGAAG CTGCCAATGT CACCGTCGTC
TTGCAATTGG CCGGTAGCGG CGAATATACA GTGGTGACGA GCGGCACCAA TTTCACGTCC
CCGCTTGATG TTCTGAGCGA TTTTTCCTAT GACACACTCG AGCCATTCAG CGCGTATGTG
CCGAACTGTC CGTCGGACGC ACGCATATCG GCGGGTACGA ACGGAGCGCT GTACCAGGTA
CTGAAGACGC CAGATGAAAG TCATCAGACG CTCGTCCAAT TCCTGAGCAC CGTGCCACCG
TCCTCGGTAG TCAACGTTGT CGGGCATAGC CTTGGAGGAG CATTGGCGTC CGCGATCGTG
TTGTACCTGA AGAATCAGAG CGGCTTGCAG TCTCTGACGT ACCACTGCCA GACGTTTGCC
GCGCCGACGG CAGGCAACGA TGTGTTCGCC GGCTATTTCG ACGAGCAGAT GCGAGGCAAT
GCGGTGCGCA TATTCACGAC GCGGGATATC GTGCCGATGG CATGGAATGC GGACAGCCTC
CAGAAGGTGA AACACGTCTA CAGCGACGTT CCTCACCATG ACACTCCTGA TAACGTGAAG
GTTGCTGTCG ATCTGCTCAG CGTTGCTACA GCGTCGCTGA AGTACACGCA ATGGGGAACG
TCCGAACCAT CAGGGCCCGT GGCGACGGCG ATGGAGTACC CGCTGAAGGC GGACGTCAAT
GTAGCCATTC TGGATTTCCA GGCGCAGGTT GGCTATCAGC ATATCGACGG ATACATTGCC
TGCCTTGGTA TGGCCCGCAG CGACATTGAT CTCCCGCCGC CGCCACAGGT CAACCCCAAG
GTCGGTAAAA CGCCCGTGTG A
 
Protein sequence
MTSSRLEQMQ ANLTLAYVLN NAAVDGAGRE LKHPTASQVK KIIVDRLNRS TMTRNDRFEI 
AWGPAIVLDP NGEAANVTVV LQLAGSGEYT VVTSGTNFTS PLDVLSDFSY DTLEPFSAYV
PNCPSDARIS AGTNGALYQV LKTPDESHQT LVQFLSTVPP SSVVNVVGHS LGGALASAIV
LYLKNQSGLQ SLTYHCQTFA APTAGNDVFA GYFDEQMRGN AVRIFTTRDI VPMAWNADSL
QKVKHVYSDV PHHDTPDNVK VAVDLLSVAT ASLKYTQWGT SEPSGPVATA MEYPLKADVN
VAILDFQAQV GYQHIDGYIA CLGMARSDID LPPPPQVNPK VGKTPV