| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5155 |
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| Symbol | |
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| ID | 6179839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2333982 |
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| End bp | 2335427 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641684906 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001811816 |
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| Protein GI | 172064165 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.239334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.865316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATA ACGGCAAGAA AGCGGGTGGC ATGCGTCGCT GGATCTACGC TCTGATGTTC
TTCGTTTCGT TTGCATGCGA CGCTGAAACG CGCGGCTTGC CGGACGGCTT CGTCGATCCG
TTGTCGACTC GTCCGCCAGT ATTGGATGCG GAGCCCAGAT TACCTGGCGA CGACATGCCG
GTTGCGTGTT CTTCATCCAC GGACCTGACG AAACCGCTGA CGATCGGCGA TGCGGTTGAC
CTCGCGCTGT GCCACAACCC GCGCGTTCAG GTGGCGTGGG CATCGATCAA GATCCAGGCT
GCCGCGCTGG GTGAAGCCAG CGCGGCATGG CTTCCCACCG TCAATGGGTC GATCAGCCAA
CTGGCAACCT ACAACCGATA TCAGGATGCG CGAACGATGA ATACGCACGG CGTCGGCAGG
ACAATGAATG CCAGCCTCAA CTGGAGATTG CTCGACTTTG GCGGGCGGGC TGCGAACCGC
GCCGCGGCGC AACAGCTGCT GACGGCCGCG TTGGCTGGTC ACGATGCCTC GATGCAAAAG
GCGGTCGTGG ATGTCATAGG AAGCTATTTC GATGTCCAGA ATGCGCAAGC GGCGCGTATA
GCGCGTACCG AGTCCGCGGA GTTGGCCGAG TCCACGTTGC GTGCGTCGCG TCAGCGGTTG
GTCAGGGGCG TCGCGTCCCG AGCAGACGTA TTGCAGGCTG AGGCGGCATG GGCCAAGGCG
ATATTGGCCG CACGGCGAGC GGACGGGGAT GTGGCGCGTG CGCGTGCGGA ACTGGTCTTT
GCGGCGGGGC TGCCTGCGGG CACGCGAATC GAGGTCGAGT CGGCAATCGT ACCGGTAGCG
TCGGATGCGG AACGCCAGTT GAGCGACTGG CTTCGCACCG CAGAGGAAGC TCACCCGGAA
ATCCGGGCTG CACGTGCTAA ATGGAAGGCT GCGGAAGCGA AGGTGACGAC CACACGGTCA
GAAGGCATGC CGACCGTCGA TCTAAGCGGC ACGCTGTCGC GGAACGGCTA CCCGAATCAG
GGGTTGCAGT CAGTGCGGGC GACGCAAACC AGCATCGGCC TGACTTTGAC GATTCCGTTC
TTTGACGGCT TTTCTCGCAC GTATCGGATT CGCGGCGCGC AGGCTCAGGC CGAACTGGCA
CAGGCACAGC TTCTCGATAC GCAGCAGCAG ATTCTGCGTG ACGTGCTGAA GGCCCATGCC
GACGCGGAGA CGACGGCGGA TAGCCTGGAT GCGTCTGCAC GCTTGCTGGC TGCGGCGGAA
GCGGCGCTGA CATCGGCGCG CAATCGTTAC GCGTTCGGCG CAGGAGATAT TCTGGAACTG
CTGTCGGCAC AAGCGGCGCT TGCCGATGCC CGCCAGGAAC GGGTGCGAAC GCTGGCCGAG
TGGGAAGCGG CACGGCTGCG CCTGTTTGCC AGCGCTGGCG TCATCGGACG ATGGGCATTT
CGGTAG
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| Protein sequence | MSDNGKKAGG MRRWIYALMF FVSFACDAET RGLPDGFVDP LSTRPPVLDA EPRLPGDDMP
VACSSSTDLT KPLTIGDAVD LALCHNPRVQ VAWASIKIQA AALGEASAAW LPTVNGSISQ
LATYNRYQDA RTMNTHGVGR TMNASLNWRL LDFGGRAANR AAAQQLLTAA LAGHDASMQK
AVVDVIGSYF DVQNAQAARI ARTESAELAE STLRASRQRL VRGVASRADV LQAEAAWAKA
ILAARRADGD VARARAELVF AAGLPAGTRI EVESAIVPVA SDAERQLSDW LRTAEEAHPE
IRAARAKWKA AEAKVTTTRS EGMPTVDLSG TLSRNGYPNQ GLQSVRATQT SIGLTLTIPF
FDGFSRTYRI RGAQAQAELA QAQLLDTQQQ ILRDVLKAHA DAETTADSLD ASARLLAAAE
AALTSARNRY AFGAGDILEL LSAQAALADA RQERVRTLAE WEAARLRLFA SAGVIGRWAF
R
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