| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4840 |
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| Symbol | |
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| ID | 6179879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1979723 |
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| End bp | 1980400 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684595 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001811506 |
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| Protein GI | 172063855 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.545995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.251621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCT TGATGAACTA CGGCGCGCAG ATCGCGGCTG GCGCGCTCGT CACGCTGGAG
CTTGCGGTCG CCGCGCTGTG CGTCGGCATG CTGCTCGGCA TCGCCGGTGC GTCGGCAAAA
CTGTCGAGCC TGGGGTGGCT CAGGCATGCG ACCTATGCGC TGACAAATTT CCTGCGCGGC
ATTCCCGAGT TCCTGATCCT GTTGATCTGC TACTTCGGGC TGTCGCATCT GCTCAACGCG
CAATTCGATG GCGCCATTGT CATCAGTCCA TTCTCCGCCG GCGTGATCGC GCTCGCCGTG
GTGTTCGGCG CCTACTCGTC GGAGATGTTC CGCGGCGCGT TCATCGCGGT GCCGGCCGGA
CAGATCGAGG CCGCGCGCGC GTACGGGATG ACACGCCTGC AGACACTGTG GTACGTGCGG
CTGCCGCAGG CGTGGCGCAT CTGCCTGCCG AGCCTGAACA ACATGTGGCA GAACCTGCTG
AAGGACACGT CGCTGGTGTC GATCGTCGGG CTCGAGGACA TGTTGCGCAA GGCGAACATC
GCCGCGCAGT TCACCAAGCA GCCGTTCGTC TTCTACGTGA CGGTCGGAAT CGTCTATTTC
GGCTTTCTCG CCGCATCCAA CCCCGTGTTC GCGTGGCTCG AGCGCATCGC GGGCCGCGGT
TACGCAAAAC GCACCTGA
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| Protein sequence | MDILMNYGAQ IAAGALVTLE LAVAALCVGM LLGIAGASAK LSSLGWLRHA TYALTNFLRG
IPEFLILLIC YFGLSHLLNA QFDGAIVISP FSAGVIALAV VFGAYSSEMF RGAFIAVPAG
QIEAARAYGM TRLQTLWYVR LPQAWRICLP SLNNMWQNLL KDTSLVSIVG LEDMLRKANI
AAQFTKQPFV FYVTVGIVYF GFLAASNPVF AWLERIAGRG YAKRT
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